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From diffusion in compartmentalized media to non-Gaussian random walks

In this work we establish a link between two different phenomena that were studied in a large and growing number of biological, composite and soft media: the diffusion in compartmentalized environment and the non-Gaussian diffusion that exhibits linear or power-law growth of the mean square displace...

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Detalles Bibliográficos
Autores principales: Ślęzak, Jakub, Burov, Stanislav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7930099/
https://www.ncbi.nlm.nih.gov/pubmed/33658556
http://dx.doi.org/10.1038/s41598-021-83364-0
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author Ślęzak, Jakub
Burov, Stanislav
author_facet Ślęzak, Jakub
Burov, Stanislav
author_sort Ślęzak, Jakub
collection PubMed
description In this work we establish a link between two different phenomena that were studied in a large and growing number of biological, composite and soft media: the diffusion in compartmentalized environment and the non-Gaussian diffusion that exhibits linear or power-law growth of the mean square displacement joined by the exponential shape of the positional probability density. We explore a microscopic model that gives rise to transient confinement, similar to the one observed for hop-diffusion on top of a cellular membrane. The compartmentalization of the media is achieved by introducing randomly placed, identical barriers. Using this model of a heterogeneous medium we derive a general class of random walks with simple jump rules that are dictated by the geometry of the compartments. Exponential decay of positional probability density is observed and we also quantify the significant decrease of the long time diffusion constant. Our results suggest that the observed exponential decay is a general feature of the transient regime in compartmentalized media.
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spelling pubmed-79300992021-03-04 From diffusion in compartmentalized media to non-Gaussian random walks Ślęzak, Jakub Burov, Stanislav Sci Rep Article In this work we establish a link between two different phenomena that were studied in a large and growing number of biological, composite and soft media: the diffusion in compartmentalized environment and the non-Gaussian diffusion that exhibits linear or power-law growth of the mean square displacement joined by the exponential shape of the positional probability density. We explore a microscopic model that gives rise to transient confinement, similar to the one observed for hop-diffusion on top of a cellular membrane. The compartmentalization of the media is achieved by introducing randomly placed, identical barriers. Using this model of a heterogeneous medium we derive a general class of random walks with simple jump rules that are dictated by the geometry of the compartments. Exponential decay of positional probability density is observed and we also quantify the significant decrease of the long time diffusion constant. Our results suggest that the observed exponential decay is a general feature of the transient regime in compartmentalized media. Nature Publishing Group UK 2021-03-03 /pmc/articles/PMC7930099/ /pubmed/33658556 http://dx.doi.org/10.1038/s41598-021-83364-0 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ślęzak, Jakub
Burov, Stanislav
From diffusion in compartmentalized media to non-Gaussian random walks
title From diffusion in compartmentalized media to non-Gaussian random walks
title_full From diffusion in compartmentalized media to non-Gaussian random walks
title_fullStr From diffusion in compartmentalized media to non-Gaussian random walks
title_full_unstemmed From diffusion in compartmentalized media to non-Gaussian random walks
title_short From diffusion in compartmentalized media to non-Gaussian random walks
title_sort from diffusion in compartmentalized media to non-gaussian random walks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7930099/
https://www.ncbi.nlm.nih.gov/pubmed/33658556
http://dx.doi.org/10.1038/s41598-021-83364-0
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