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Correlation Constraints for Regression Models: Controlling Bias in Brain Age Prediction
In neuroimaging, the difference between chronological age and predicted brain age, also known as brain age delta, has been proposed as a pathology marker linked to a range of phenotypes. Brain age delta is estimated using regression, which involves a frequently observed bias due to a negative correl...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7930839/ https://www.ncbi.nlm.nih.gov/pubmed/33679476 http://dx.doi.org/10.3389/fpsyt.2021.615754 |
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author | Treder, Matthias S. Shock, Jonathan P. Stein, Dan J. du Plessis, Stéfan Seedat, Soraya Tsvetanov, Kamen A. |
author_facet | Treder, Matthias S. Shock, Jonathan P. Stein, Dan J. du Plessis, Stéfan Seedat, Soraya Tsvetanov, Kamen A. |
author_sort | Treder, Matthias S. |
collection | PubMed |
description | In neuroimaging, the difference between chronological age and predicted brain age, also known as brain age delta, has been proposed as a pathology marker linked to a range of phenotypes. Brain age delta is estimated using regression, which involves a frequently observed bias due to a negative correlation between chronological age and brain age delta. In brain age prediction models, this correlation can manifest as an overprediction of the age of young brains and an underprediction for elderly ones. We show that this bias can be controlled for by adding correlation constraints to the model training procedure. We develop an analytical solution to this constrained optimization problem for Linear, Ridge, and Kernel Ridge regression. The solution is optimal in the least-squares sense i.e., there is no other model that satisfies the correlation constraints and has a better fit. Analyses on the PAC2019 competition data demonstrate that this approach produces optimal unbiased predictive models with a number of advantages over existing approaches. Finally, we introduce regression toolboxes for Python and MATLAB that implement our algorithm. |
format | Online Article Text |
id | pubmed-7930839 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-79308392021-03-05 Correlation Constraints for Regression Models: Controlling Bias in Brain Age Prediction Treder, Matthias S. Shock, Jonathan P. Stein, Dan J. du Plessis, Stéfan Seedat, Soraya Tsvetanov, Kamen A. Front Psychiatry Psychiatry In neuroimaging, the difference between chronological age and predicted brain age, also known as brain age delta, has been proposed as a pathology marker linked to a range of phenotypes. Brain age delta is estimated using regression, which involves a frequently observed bias due to a negative correlation between chronological age and brain age delta. In brain age prediction models, this correlation can manifest as an overprediction of the age of young brains and an underprediction for elderly ones. We show that this bias can be controlled for by adding correlation constraints to the model training procedure. We develop an analytical solution to this constrained optimization problem for Linear, Ridge, and Kernel Ridge regression. The solution is optimal in the least-squares sense i.e., there is no other model that satisfies the correlation constraints and has a better fit. Analyses on the PAC2019 competition data demonstrate that this approach produces optimal unbiased predictive models with a number of advantages over existing approaches. Finally, we introduce regression toolboxes for Python and MATLAB that implement our algorithm. Frontiers Media S.A. 2021-02-18 /pmc/articles/PMC7930839/ /pubmed/33679476 http://dx.doi.org/10.3389/fpsyt.2021.615754 Text en Copyright © 2021 Treder, Shock, Stein, du Plessis, Seedat and Tsvetanov. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Psychiatry Treder, Matthias S. Shock, Jonathan P. Stein, Dan J. du Plessis, Stéfan Seedat, Soraya Tsvetanov, Kamen A. Correlation Constraints for Regression Models: Controlling Bias in Brain Age Prediction |
title | Correlation Constraints for Regression Models: Controlling Bias in Brain Age Prediction |
title_full | Correlation Constraints for Regression Models: Controlling Bias in Brain Age Prediction |
title_fullStr | Correlation Constraints for Regression Models: Controlling Bias in Brain Age Prediction |
title_full_unstemmed | Correlation Constraints for Regression Models: Controlling Bias in Brain Age Prediction |
title_short | Correlation Constraints for Regression Models: Controlling Bias in Brain Age Prediction |
title_sort | correlation constraints for regression models: controlling bias in brain age prediction |
topic | Psychiatry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7930839/ https://www.ncbi.nlm.nih.gov/pubmed/33679476 http://dx.doi.org/10.3389/fpsyt.2021.615754 |
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