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IGLL5 is correlated with tumor‐infiltrating immune cells in clear cell renal cell carcinoma
Renal cell carcinomas (RCCs) account for about 90% of renal tumors, and their major histological subtype is ccRCC (clear cell RCC). Increasing evidence has indicated that the tumor microenvironment plays a significant role in the occurrence and development of ccRCC. In this study, we used ESTIMATE a...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7931224/ https://www.ncbi.nlm.nih.gov/pubmed/33449444 http://dx.doi.org/10.1002/2211-5463.13085 |
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author | Xia, Zhi‐Nan Wang, Xing‐Yuan Cai, Li‐Cheng Jian, Wen‐Gang Zhang, Cheng |
author_facet | Xia, Zhi‐Nan Wang, Xing‐Yuan Cai, Li‐Cheng Jian, Wen‐Gang Zhang, Cheng |
author_sort | Xia, Zhi‐Nan |
collection | PubMed |
description | Renal cell carcinomas (RCCs) account for about 90% of renal tumors, and their major histological subtype is ccRCC (clear cell RCC). Increasing evidence has indicated that the tumor microenvironment plays a significant role in the occurrence and development of ccRCC. In this study, we used ESTIMATE and CIBERSORT computational methods to calculate the proportion of immune and stromal components and the rate of TICs (tumor‐infiltrating immune cells) in 539 ccRCC samples from The Cancer Genome Atlas database. By examining the intersection of the differentially expressed genes obtained by the protein–protein interaction network and Cox regression analysis, we identified only one overlapping gene: IGLL5 (immunoglobulin lambda‐like polypeptide 5). We report that IGLL5 expression is correlated with TICs. Furthermore, our immunoinfiltration analyses revealed that three types of TIC are positively correlated with IGLL5 expression. IGLL5 may have potential as a prognostic biomarker of ccRCC. |
format | Online Article Text |
id | pubmed-7931224 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-79312242021-03-15 IGLL5 is correlated with tumor‐infiltrating immune cells in clear cell renal cell carcinoma Xia, Zhi‐Nan Wang, Xing‐Yuan Cai, Li‐Cheng Jian, Wen‐Gang Zhang, Cheng FEBS Open Bio Research Articles Renal cell carcinomas (RCCs) account for about 90% of renal tumors, and their major histological subtype is ccRCC (clear cell RCC). Increasing evidence has indicated that the tumor microenvironment plays a significant role in the occurrence and development of ccRCC. In this study, we used ESTIMATE and CIBERSORT computational methods to calculate the proportion of immune and stromal components and the rate of TICs (tumor‐infiltrating immune cells) in 539 ccRCC samples from The Cancer Genome Atlas database. By examining the intersection of the differentially expressed genes obtained by the protein–protein interaction network and Cox regression analysis, we identified only one overlapping gene: IGLL5 (immunoglobulin lambda‐like polypeptide 5). We report that IGLL5 expression is correlated with TICs. Furthermore, our immunoinfiltration analyses revealed that three types of TIC are positively correlated with IGLL5 expression. IGLL5 may have potential as a prognostic biomarker of ccRCC. John Wiley and Sons Inc. 2021-02-05 /pmc/articles/PMC7931224/ /pubmed/33449444 http://dx.doi.org/10.1002/2211-5463.13085 Text en © 2021 The Authors. FEBS Open Bio published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Xia, Zhi‐Nan Wang, Xing‐Yuan Cai, Li‐Cheng Jian, Wen‐Gang Zhang, Cheng IGLL5 is correlated with tumor‐infiltrating immune cells in clear cell renal cell carcinoma |
title |
IGLL5 is correlated with tumor‐infiltrating immune cells in clear cell renal cell carcinoma |
title_full |
IGLL5 is correlated with tumor‐infiltrating immune cells in clear cell renal cell carcinoma |
title_fullStr |
IGLL5 is correlated with tumor‐infiltrating immune cells in clear cell renal cell carcinoma |
title_full_unstemmed |
IGLL5 is correlated with tumor‐infiltrating immune cells in clear cell renal cell carcinoma |
title_short |
IGLL5 is correlated with tumor‐infiltrating immune cells in clear cell renal cell carcinoma |
title_sort | igll5 is correlated with tumor‐infiltrating immune cells in clear cell renal cell carcinoma |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7931224/ https://www.ncbi.nlm.nih.gov/pubmed/33449444 http://dx.doi.org/10.1002/2211-5463.13085 |
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