Cargando…
Twelve years of SAMtools and BCFtools
BACKGROUND: SAMtools and BCFtools are widely used programs for processing and analysing high-throughput sequencing data. They include tools for file format conversion and manipulation, sorting, querying, statistics, variant calling, and effect analysis amongst other methods. FINDINGS: The first vers...
Autores principales: | Danecek, Petr, Bonfield, James K, Liddle, Jennifer, Marshall, John, Ohan, Valeriu, Pollard, Martin O, Whitwham, Andrew, Keane, Thomas, McCarthy, Shane A, Davies, Robert M, Li, Heng |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7931819/ https://www.ncbi.nlm.nih.gov/pubmed/33590861 http://dx.doi.org/10.1093/gigascience/giab008 |
Ejemplares similares
-
HTSlib: C library for reading/writing high-throughput sequencing data
por: Bonfield, James K, et al.
Publicado: (2021) -
BCFtools/csq: haplotype-aware variant consequences
por: Danecek, Petr, et al.
Publicado: (2017) -
The Sequence Alignment/Map format and SAMtools
por: Li, Heng, et al.
Publicado: (2009) -
BCFtools/RoH: a hidden Markov model approach for detecting autozygosity from next-generation sequencing data
por: Narasimhan, Vagheesh, et al.
Publicado: (2016) -
Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments
por: Ramirez-Gonzalez, Ricardo H, et al.
Publicado: (2012)