Cargando…

Mutational Pattern in Multiple Pulmonary Nodules Are Associated With Early Stage Lung Adenocarcinoma

The clinical significance of mutation in multiple pulmonary nodules is largely limited by single gene mutation-directed analysis and lack of validation of gene expression profiles. New analytic strategy is urgently needed for comprehensive understanding of genomic data in multiple pulmonary nodules....

Descripción completa

Detalles Bibliográficos
Autores principales: Dong, Shao-wei, Li, Rong, Cheng, Zhiqiang, Liu, Dong-cheng, Xia, Jinquan, Xu, Jing, Li, Shixuan, Wang, Jian, Yue, Yongjian, Fan, Yingrui, Cao, Yundi, Dai, Lingyun, Wang, Jigang, Zhao, Pan, Wang, Xin, Xiao, Zhangang, Qiu, Chen, Wang, Guang-suo, Zou, Chang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7934775/
https://www.ncbi.nlm.nih.gov/pubmed/33680914
http://dx.doi.org/10.3389/fonc.2020.571521
_version_ 1783660879511814144
author Dong, Shao-wei
Li, Rong
Cheng, Zhiqiang
Liu, Dong-cheng
Xia, Jinquan
Xu, Jing
Li, Shixuan
Wang, Jian
Yue, Yongjian
Fan, Yingrui
Cao, Yundi
Dai, Lingyun
Wang, Jigang
Zhao, Pan
Wang, Xin
Xiao, Zhangang
Qiu, Chen
Wang, Guang-suo
Zou, Chang
author_facet Dong, Shao-wei
Li, Rong
Cheng, Zhiqiang
Liu, Dong-cheng
Xia, Jinquan
Xu, Jing
Li, Shixuan
Wang, Jian
Yue, Yongjian
Fan, Yingrui
Cao, Yundi
Dai, Lingyun
Wang, Jigang
Zhao, Pan
Wang, Xin
Xiao, Zhangang
Qiu, Chen
Wang, Guang-suo
Zou, Chang
author_sort Dong, Shao-wei
collection PubMed
description The clinical significance of mutation in multiple pulmonary nodules is largely limited by single gene mutation-directed analysis and lack of validation of gene expression profiles. New analytic strategy is urgently needed for comprehensive understanding of genomic data in multiple pulmonary nodules. In this study, we performed whole exome sequencing in 16 multiple lung nodules and 5 adjacent normal tissues from 4 patients with multiple pulmonary nodules and decoded the mutation information from a perspective of cellular functions and signaling pathways. Mutated genes as well as mutation patterns shared in more than two lesions were identified and characterized. We found that the number of mutations or mutated genes and the extent of protein structural changes caused by different mutations is positively correlated with the degree of malignancy. Moreover, the mutated genes in the nodules are associated with the molecular functions or signaling pathways related to cell proliferation and survival. We showed a developing pattern of quantity (the number of mutations/mutated genes) and quality (the extent of protein structural changes) in multiple pulmonary nodules. The mutation and mutated genes in multiple pulmonary nodules are associated with cell proliferation and survival related signaling pathways. This study provides a new perspective for comprehension of genomic mutational data and might shed new light on deciphering molecular evolution of early stage lung adenocarcinoma.
format Online
Article
Text
id pubmed-7934775
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-79347752021-03-06 Mutational Pattern in Multiple Pulmonary Nodules Are Associated With Early Stage Lung Adenocarcinoma Dong, Shao-wei Li, Rong Cheng, Zhiqiang Liu, Dong-cheng Xia, Jinquan Xu, Jing Li, Shixuan Wang, Jian Yue, Yongjian Fan, Yingrui Cao, Yundi Dai, Lingyun Wang, Jigang Zhao, Pan Wang, Xin Xiao, Zhangang Qiu, Chen Wang, Guang-suo Zou, Chang Front Oncol Oncology The clinical significance of mutation in multiple pulmonary nodules is largely limited by single gene mutation-directed analysis and lack of validation of gene expression profiles. New analytic strategy is urgently needed for comprehensive understanding of genomic data in multiple pulmonary nodules. In this study, we performed whole exome sequencing in 16 multiple lung nodules and 5 adjacent normal tissues from 4 patients with multiple pulmonary nodules and decoded the mutation information from a perspective of cellular functions and signaling pathways. Mutated genes as well as mutation patterns shared in more than two lesions were identified and characterized. We found that the number of mutations or mutated genes and the extent of protein structural changes caused by different mutations is positively correlated with the degree of malignancy. Moreover, the mutated genes in the nodules are associated with the molecular functions or signaling pathways related to cell proliferation and survival. We showed a developing pattern of quantity (the number of mutations/mutated genes) and quality (the extent of protein structural changes) in multiple pulmonary nodules. The mutation and mutated genes in multiple pulmonary nodules are associated with cell proliferation and survival related signaling pathways. This study provides a new perspective for comprehension of genomic mutational data and might shed new light on deciphering molecular evolution of early stage lung adenocarcinoma. Frontiers Media S.A. 2021-02-19 /pmc/articles/PMC7934775/ /pubmed/33680914 http://dx.doi.org/10.3389/fonc.2020.571521 Text en Copyright © 2021 Dong, Li, Cheng, Liu, Xia, Xu, Li, Wang, Yue, Fan, Cao, Dai, Wang, Zhao, Wang, Xiao, Qiu, Wang and Zou http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Dong, Shao-wei
Li, Rong
Cheng, Zhiqiang
Liu, Dong-cheng
Xia, Jinquan
Xu, Jing
Li, Shixuan
Wang, Jian
Yue, Yongjian
Fan, Yingrui
Cao, Yundi
Dai, Lingyun
Wang, Jigang
Zhao, Pan
Wang, Xin
Xiao, Zhangang
Qiu, Chen
Wang, Guang-suo
Zou, Chang
Mutational Pattern in Multiple Pulmonary Nodules Are Associated With Early Stage Lung Adenocarcinoma
title Mutational Pattern in Multiple Pulmonary Nodules Are Associated With Early Stage Lung Adenocarcinoma
title_full Mutational Pattern in Multiple Pulmonary Nodules Are Associated With Early Stage Lung Adenocarcinoma
title_fullStr Mutational Pattern in Multiple Pulmonary Nodules Are Associated With Early Stage Lung Adenocarcinoma
title_full_unstemmed Mutational Pattern in Multiple Pulmonary Nodules Are Associated With Early Stage Lung Adenocarcinoma
title_short Mutational Pattern in Multiple Pulmonary Nodules Are Associated With Early Stage Lung Adenocarcinoma
title_sort mutational pattern in multiple pulmonary nodules are associated with early stage lung adenocarcinoma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7934775/
https://www.ncbi.nlm.nih.gov/pubmed/33680914
http://dx.doi.org/10.3389/fonc.2020.571521
work_keys_str_mv AT dongshaowei mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT lirong mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT chengzhiqiang mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT liudongcheng mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT xiajinquan mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT xujing mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT lishixuan mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT wangjian mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT yueyongjian mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT fanyingrui mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT caoyundi mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT dailingyun mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT wangjigang mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT zhaopan mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT wangxin mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT xiaozhangang mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT qiuchen mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT wangguangsuo mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma
AT zouchang mutationalpatterninmultiplepulmonarynodulesareassociatedwithearlystagelungadenocarcinoma