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Advances for the Hepatitis A Virus Antigen Production Using a Virus Strain With Codon Frequency Optimization Adjustments in Specific Locations

The available cell-adapted hepatitis A virus (HAV) strains show a very slow replication phenotype hampering the affordable production of antigen. A fast-growing strain characterized by the occurrence of mutations in the internal ribosome entry site (IRES), combined with changes in the codon composit...

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Autores principales: Chavarria-Miró, Gemma, de Castellarnau, Montserrat, Fuentes, Cristina, D’Andrea, Lucía, Pérez-Rodríguez, Francisco-Javier, Beguiristain, Nerea, Bosch, Albert, Guix, Susana, Pintó, Rosa M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7935560/
https://www.ncbi.nlm.nih.gov/pubmed/33679679
http://dx.doi.org/10.3389/fmicb.2021.642267
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author Chavarria-Miró, Gemma
de Castellarnau, Montserrat
Fuentes, Cristina
D’Andrea, Lucía
Pérez-Rodríguez, Francisco-Javier
Beguiristain, Nerea
Bosch, Albert
Guix, Susana
Pintó, Rosa M.
author_facet Chavarria-Miró, Gemma
de Castellarnau, Montserrat
Fuentes, Cristina
D’Andrea, Lucía
Pérez-Rodríguez, Francisco-Javier
Beguiristain, Nerea
Bosch, Albert
Guix, Susana
Pintó, Rosa M.
author_sort Chavarria-Miró, Gemma
collection PubMed
description The available cell-adapted hepatitis A virus (HAV) strains show a very slow replication phenotype hampering the affordable production of antigen. A fast-growing strain characterized by the occurrence of mutations in the internal ribosome entry site (IRES), combined with changes in the codon composition has been selected in our laboratory. A characterization of the IRES activity of this fast-growing strain (HM175-HP; HP) vs. its parental strain (HM175; L0) was assessed in two cell substrates used in vaccine production (MRC-5 and Vero cells) compared with the FRhK-4 cell line in which its selection was performed. The HP-derived IRES was significantly more active than the L0-derived IRES in all cells tested and both IRES were more active in the FRhK-4 cells. The translation efficiency of the HP-derived IRES was also much higher than the L0-derived IRES, particularly, in genes with a HP codon usage background. These results correlated with a higher virus production in a shorter time for the HP strain compared to the L0 strain in any of the three cell lines tested, and of both strains in the FRhK-4 cells compared to Vero and MRC-5 cells. The addition of wortmannin resulted in the increase of infectious viruses and antigen in the supernatant of FRhK-4 infected cells, independently of the strain. Finally, the replication of both strains in a clone of FRhK-4 cells adapted to grow with synthetic sera was optimal and again the HP strain showed higher yields.
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spelling pubmed-79355602021-03-06 Advances for the Hepatitis A Virus Antigen Production Using a Virus Strain With Codon Frequency Optimization Adjustments in Specific Locations Chavarria-Miró, Gemma de Castellarnau, Montserrat Fuentes, Cristina D’Andrea, Lucía Pérez-Rodríguez, Francisco-Javier Beguiristain, Nerea Bosch, Albert Guix, Susana Pintó, Rosa M. Front Microbiol Microbiology The available cell-adapted hepatitis A virus (HAV) strains show a very slow replication phenotype hampering the affordable production of antigen. A fast-growing strain characterized by the occurrence of mutations in the internal ribosome entry site (IRES), combined with changes in the codon composition has been selected in our laboratory. A characterization of the IRES activity of this fast-growing strain (HM175-HP; HP) vs. its parental strain (HM175; L0) was assessed in two cell substrates used in vaccine production (MRC-5 and Vero cells) compared with the FRhK-4 cell line in which its selection was performed. The HP-derived IRES was significantly more active than the L0-derived IRES in all cells tested and both IRES were more active in the FRhK-4 cells. The translation efficiency of the HP-derived IRES was also much higher than the L0-derived IRES, particularly, in genes with a HP codon usage background. These results correlated with a higher virus production in a shorter time for the HP strain compared to the L0 strain in any of the three cell lines tested, and of both strains in the FRhK-4 cells compared to Vero and MRC-5 cells. The addition of wortmannin resulted in the increase of infectious viruses and antigen in the supernatant of FRhK-4 infected cells, independently of the strain. Finally, the replication of both strains in a clone of FRhK-4 cells adapted to grow with synthetic sera was optimal and again the HP strain showed higher yields. Frontiers Media S.A. 2021-02-18 /pmc/articles/PMC7935560/ /pubmed/33679679 http://dx.doi.org/10.3389/fmicb.2021.642267 Text en Copyright © 2021 Chavarria-Miró, de Castellarnau, Fuentes, D’Andrea, Pérez-Rodríguez, Beguiristain, Bosch, Guix and Pintó. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Chavarria-Miró, Gemma
de Castellarnau, Montserrat
Fuentes, Cristina
D’Andrea, Lucía
Pérez-Rodríguez, Francisco-Javier
Beguiristain, Nerea
Bosch, Albert
Guix, Susana
Pintó, Rosa M.
Advances for the Hepatitis A Virus Antigen Production Using a Virus Strain With Codon Frequency Optimization Adjustments in Specific Locations
title Advances for the Hepatitis A Virus Antigen Production Using a Virus Strain With Codon Frequency Optimization Adjustments in Specific Locations
title_full Advances for the Hepatitis A Virus Antigen Production Using a Virus Strain With Codon Frequency Optimization Adjustments in Specific Locations
title_fullStr Advances for the Hepatitis A Virus Antigen Production Using a Virus Strain With Codon Frequency Optimization Adjustments in Specific Locations
title_full_unstemmed Advances for the Hepatitis A Virus Antigen Production Using a Virus Strain With Codon Frequency Optimization Adjustments in Specific Locations
title_short Advances for the Hepatitis A Virus Antigen Production Using a Virus Strain With Codon Frequency Optimization Adjustments in Specific Locations
title_sort advances for the hepatitis a virus antigen production using a virus strain with codon frequency optimization adjustments in specific locations
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7935560/
https://www.ncbi.nlm.nih.gov/pubmed/33679679
http://dx.doi.org/10.3389/fmicb.2021.642267
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