Cargando…
Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer
Although artificial intelligence algorithms are often developed and applied for narrow tasks, their implementation in other medical settings could help to improve patient care. Here we assess whether a deep-learning system for volumetric heart segmentation on computed tomography (CT) scans developed...
Autores principales: | , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7935874/ https://www.ncbi.nlm.nih.gov/pubmed/33674717 http://dx.doi.org/10.1038/s41746-021-00416-5 |
_version_ | 1783661086322458624 |
---|---|
author | Zeleznik, Roman Weiss, Jakob Taron, Jana Guthier, Christian Bitterman, Danielle S. Hancox, Cindy Kann, Benjamin H. Kim, Daniel W. Punglia, Rinaa S. Bredfeldt, Jeremy Foldyna, Borek Eslami, Parastou Lu, Michael T. Hoffmann, Udo Mak, Raymond Aerts, Hugo J. W. L. |
author_facet | Zeleznik, Roman Weiss, Jakob Taron, Jana Guthier, Christian Bitterman, Danielle S. Hancox, Cindy Kann, Benjamin H. Kim, Daniel W. Punglia, Rinaa S. Bredfeldt, Jeremy Foldyna, Borek Eslami, Parastou Lu, Michael T. Hoffmann, Udo Mak, Raymond Aerts, Hugo J. W. L. |
author_sort | Zeleznik, Roman |
collection | PubMed |
description | Although artificial intelligence algorithms are often developed and applied for narrow tasks, their implementation in other medical settings could help to improve patient care. Here we assess whether a deep-learning system for volumetric heart segmentation on computed tomography (CT) scans developed in cardiovascular radiology can optimize treatment planning in radiation oncology. The system was trained using multi-center data (n = 858) with manual heart segmentations provided by cardiovascular radiologists. Validation of the system was performed in an independent real-world dataset of 5677 breast cancer patients treated with radiation therapy at the Dana-Farber/Brigham and Women’s Cancer Center between 2008–2018. In a subset of 20 patients, the performance of the system was compared to eight radiation oncology experts by assessing segmentation time, agreement between experts, and accuracy with and without deep-learning assistance. To compare the performance to segmentations used in the clinic, concordance and failures (defined as Dice < 0.85) of the system were evaluated in the entire dataset. The system was successfully applied without retraining. With deep-learning assistance, segmentation time significantly decreased (4.0 min [IQR 3.1–5.0] vs. 2.0 min [IQR 1.3–3.5]; p < 0.001), and agreement increased (Dice 0.95 [IQR = 0.02]; vs. 0.97 [IQR = 0.02], p < 0.001). Expert accuracy was similar with and without deep-learning assistance (Dice 0.92 [IQR = 0.02] vs. 0.92 [IQR = 0.02]; p = 0.48), and not significantly different from deep-learning-only segmentations (Dice 0.92 [IQR = 0.02]; p ≥ 0.1). In comparison to real-world data, the system showed high concordance (Dice 0.89 [IQR = 0.06]) across 5677 patients and a significantly lower failure rate (p < 0.001). These results suggest that deep-learning algorithms can successfully be applied across medical specialties and improve clinical care beyond the original field of interest. |
format | Online Article Text |
id | pubmed-7935874 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-79358742021-03-19 Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer Zeleznik, Roman Weiss, Jakob Taron, Jana Guthier, Christian Bitterman, Danielle S. Hancox, Cindy Kann, Benjamin H. Kim, Daniel W. Punglia, Rinaa S. Bredfeldt, Jeremy Foldyna, Borek Eslami, Parastou Lu, Michael T. Hoffmann, Udo Mak, Raymond Aerts, Hugo J. W. L. NPJ Digit Med Article Although artificial intelligence algorithms are often developed and applied for narrow tasks, their implementation in other medical settings could help to improve patient care. Here we assess whether a deep-learning system for volumetric heart segmentation on computed tomography (CT) scans developed in cardiovascular radiology can optimize treatment planning in radiation oncology. The system was trained using multi-center data (n = 858) with manual heart segmentations provided by cardiovascular radiologists. Validation of the system was performed in an independent real-world dataset of 5677 breast cancer patients treated with radiation therapy at the Dana-Farber/Brigham and Women’s Cancer Center between 2008–2018. In a subset of 20 patients, the performance of the system was compared to eight radiation oncology experts by assessing segmentation time, agreement between experts, and accuracy with and without deep-learning assistance. To compare the performance to segmentations used in the clinic, concordance and failures (defined as Dice < 0.85) of the system were evaluated in the entire dataset. The system was successfully applied without retraining. With deep-learning assistance, segmentation time significantly decreased (4.0 min [IQR 3.1–5.0] vs. 2.0 min [IQR 1.3–3.5]; p < 0.001), and agreement increased (Dice 0.95 [IQR = 0.02]; vs. 0.97 [IQR = 0.02], p < 0.001). Expert accuracy was similar with and without deep-learning assistance (Dice 0.92 [IQR = 0.02] vs. 0.92 [IQR = 0.02]; p = 0.48), and not significantly different from deep-learning-only segmentations (Dice 0.92 [IQR = 0.02]; p ≥ 0.1). In comparison to real-world data, the system showed high concordance (Dice 0.89 [IQR = 0.06]) across 5677 patients and a significantly lower failure rate (p < 0.001). These results suggest that deep-learning algorithms can successfully be applied across medical specialties and improve clinical care beyond the original field of interest. Nature Publishing Group UK 2021-03-05 /pmc/articles/PMC7935874/ /pubmed/33674717 http://dx.doi.org/10.1038/s41746-021-00416-5 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Zeleznik, Roman Weiss, Jakob Taron, Jana Guthier, Christian Bitterman, Danielle S. Hancox, Cindy Kann, Benjamin H. Kim, Daniel W. Punglia, Rinaa S. Bredfeldt, Jeremy Foldyna, Borek Eslami, Parastou Lu, Michael T. Hoffmann, Udo Mak, Raymond Aerts, Hugo J. W. L. Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer |
title | Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer |
title_full | Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer |
title_fullStr | Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer |
title_full_unstemmed | Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer |
title_short | Deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer |
title_sort | deep-learning system to improve the quality and efficiency of volumetric heart segmentation for breast cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7935874/ https://www.ncbi.nlm.nih.gov/pubmed/33674717 http://dx.doi.org/10.1038/s41746-021-00416-5 |
work_keys_str_mv | AT zeleznikroman deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT weissjakob deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT taronjana deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT guthierchristian deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT bittermandanielles deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT hancoxcindy deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT kannbenjaminh deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT kimdanielw deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT pungliarinaas deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT bredfeldtjeremy deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT foldynaborek deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT eslamiparastou deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT lumichaelt deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT hoffmannudo deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT makraymond deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer AT aertshugojwl deeplearningsystemtoimprovethequalityandefficiencyofvolumetricheartsegmentationforbreastcancer |