Cargando…

Structural characterization and duplication modes of pseudogenes in plants

We identified and characterized the pseudogene complements of five plant species: four dicots (Arabidopsis thaliana, Vitis vinifera, Populus trichocarpa and Phaseolus vulgaris) and one monocot (Oryza sativa). Retroposition was considered of modest importance for pseudogene formation in all investiga...

Descripción completa

Detalles Bibliográficos
Autores principales:	Mascagni, Flavia, Usai, Gabriele, Cavallini, Andrea, Porceddu, Andrea
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2021
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7935947/ https://www.ncbi.nlm.nih.gov/pubmed/33674668 http://dx.doi.org/10.1038/s41598-021-84778-6

Ejemplares similares

Low Long Terminal Repeat (LTR)-Retrotransposon Expression in Leaves of the Marine Phanerogam Posidonia Oceanica L.
por: Vangelisti, Alberto, et al.
Publicado: (2020)

DNA Modification Patterns within the Transposable Elements of the Fig (Ficus carica L.) Genome
por: Usai, Gabriele, et al.
Publicado: (2021)

On the Trail of Tetu1: Genome-Wide Discovery of CACTA Transposable Elements in Sunflower Genome
por: Ventimiglia, Maria, et al.
Publicado: (2020)

In Silico Genome-Wide Characterisation of the Lipid Transfer Protein Multigenic Family in Sunflower (H. annuus L.)
por: Vangelisti, Alberto, et al.
Publicado: (2022)

LTR-retrotransposon dynamics in common fig (Ficus carica L.) genome
por: Vangelisti, Alberto, et al.
Publicado: (2021)

Discovering the Repeatome of Five Species Belonging to the Asteraceae Family: A Computational Study
por: Ventimiglia, Maria, et al.
Publicado: (2023)

Segmental duplications in the human genome reveal details of pseudogene formation
por: Khurana, Ekta, et al.
Publicado: (2010)

Repetitive DNA and Plant Domestication: Variation in Copy Number and Proximity to Genes of LTR-Retrotransposons among Wild and Cultivated Sunflower (Helianthus annuus) Genotypes
por: Mascagni, Flavia, et al.
Publicado: (2015)

Specific LTR-Retrotransposons Show Copy Number Variations between Wild and Cultivated Sunflowers
por: Mascagni, Flavia, et al.
Publicado: (2018)

Characterisation of LTR-Retrotransposons of Stevia rebaudiana and Their Use for the Analysis of Genetic Variability
por: Simoni, Samuel, et al.
Publicado: (2022)

Excision Dominates Pseudogenization During Fractionation After Whole Genome Duplication and in Gene Loss After Speciation in Plants
por: Yu, Zhe, et al.
Publicado: (2020)

Genome-wide analysis of LTR-retrotransposon diversity and its impact on the evolution of the genus Helianthus (L.)
por: Mascagni, Flavia, et al.
Publicado: (2017)

Identification and Analysis of Genes and Pseudogenes within Duplicated Regions in the Human and Mouse Genomes
por: Suyama, Mikita, et al.
Publicado: (2006)

Toll-Like Receptor Evolution in Birds: Gene Duplication, Pseudogenization, and Diversifying Selection
por: Velová, Hana, et al.
Publicado: (2018)

Pseudogenes in Human Cancer
por: Poliseno, Laura, et al.
Publicado: (2015)

Pseudogenes and Their Genome-Wide Prediction in Plants
por: Xiao, Jin, et al.
Publicado: (2016)

How an ancient, salt-tolerant fruit crop, Ficus carica L., copes with salinity: a transcriptome analysis
por: Vangelisti, Alberto, et al.
Publicado: (2019)

Trichomonas Transmembrane Cyclases Result from Massive Gene Duplication and Concomitant Development of Pseudogenes
por: Cui, Jike, et al.
Publicado: (2010)

The Singular Evolution of Olea Genome Structure
por: Mascagni, Flavia, et al.
Publicado: (2022)

Pseudogenes
por: Tutar, Yusuf
Publicado: (2012)

The GENCODE pseudogene resource
por: Pei, Baikang, et al.
Publicado: (2012)

Identification and characterization of pseudogenes in the rice gene complement
por: Thibaud-Nissen, Françoise, et al.
Publicado: (2009)

Pseudogene.org: a comprehensive database and comparison platform for pseudogene annotation
por: Karro, John E., et al.
Publicado: (2007)

Genome-Wide Analysis of WOX Multigene Family in Sunflower (Helianthus annuus L.)
por: Riccucci, Ettore, et al.
Publicado: (2023)

Arbuscular mycorrhizal fungi induce the expression of specific retrotransposons in roots of sunflower (Helianthus annuus L.)
por: Vangelisti, Alberto, et al.
Publicado: (2019)

Mode of centriole duplication and distribution
Publicado: (1990)

FTH1 Pseudogenes in Cancer and Cell Metabolism
por: Di Sanzo, Maddalena, et al.
Publicado: (2020)

Moderate Salinity Stress Affects Expression of Main Sugar Metabolism and Transport Genes and Soluble Carbohydrate Content in Ripe Fig Fruits (Ficus carica L. cv. Dottato)
por: Mascellani, Anna, et al.
Publicado: (2021)

Spatial Analyses of Mono, Di and Trinucleotide Trends in Plant Genes
por: Porceddu, Andrea, et al.
Publicado: (2011)

The human ABC transporter pseudogene family: Evidence for transcription and gene-pseudogene interference
por: Piehler, Armin P, et al.
Publicado: (2008)

Characterization of the ovine ribosomal protein SA gene and its pseudogenes
por: Van den Broeke, Alice, et al.
Publicado: (2010)

Pseudogenes in Cardiovascular Disease
por: Qi, Yanyan, et al.
Publicado: (2021)

Role of Pseudogenes in Tumorigenesis
por: Hu, Xinling, et al.
Publicado: (2018)

Cultivar-specific transcriptome prediction and annotation in Ficus carica L.
por: Solorzano Zambrano, Liceth, et al.
Publicado: (2017)

The rate and role of pseudogenes of the Mycobacterium tuberculosis complex
por: Soler-Camargo, Naila Cristina, et al.
Publicado: (2022)

The Signatures of Selection for Translational Accuracy in Plant Genes
por: Porceddu, Andrea, et al.
Publicado: (2013)

Experimental Evolution of Pseudogenization and Gene Loss in a Plant RNA Virus
por: Zwart, Mark P., et al.
Publicado: (2014)

The Evolutionary Basis of Translational Accuracy in Plants
por: Camiolo, Salvatore, et al.
Publicado: (2017)

Recognizing the pseudogenes in bacterial genomes
por: Lerat, Emmanuelle, et al.
Publicado: (2005)

Pseudofam: the pseudogene families database
por: Lam, Hugo Y. K., et al.
Publicado: (2009)

Cannot write session to /tmp/vufind_sessions/sess_vd1899eg4td1s1lrk2evia3e19