Cargando…

Assessing the genetic background and genomic relatedness of red cattle populations originating from Northern Europe

BACKGROUND: Local cattle breeds need special attention, as they are valuable reservoirs of genetic diversity. Appropriate breeding decisions and adequate genomic management of numerically smaller populations are required for their conservation. At this point, the analysis of dense genome-wide marker...

Descripción completa

Detalles Bibliográficos
Autores principales:	Schmidtmann, Christin, Schönherz, Anna, Guldbrandtsen, Bernt, Marjanovic, Jovana, Calus, Mario, Hinrichs, Dirk, Thaller, Georg
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2021
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7936461/ https://www.ncbi.nlm.nih.gov/pubmed/33676402 http://dx.doi.org/10.1186/s12711-021-00613-6

Ejemplares similares

Inbreeding and pedigree analysis of the European red dairy cattle
por: Nyman, Sofia, et al.
Publicado: (2022)

Identification of two new recessive MC1R alleles in red‐coloured Evolèner cattle and other breeds
por: Hauser, Miriam, et al.
Publicado: (2022)

Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds
por: Zhang, Qianqian, et al.
Publicado: (2015)

Genome-wide association study for female fertility in Nordic Red cattle
por: Höglund, Johanna K., et al.
Publicado: (2015)

Validation of associations for female fertility traits in Nordic Holstein, Nordic Red and Jersey dairy cattle
por: Höglund, Johanna K, et al.
Publicado: (2014)

Contribution of rare and low-frequency whole-genome sequence variants to complex traits variation in dairy cattle
por: Zhang, Qianqian, et al.
Publicado: (2017)

Human-Mediated Introgression of Haplotypes in a Modern Dairy Cattle Breed
por: Zhang, Qianqian, et al.
Publicado: (2018)

Impact of rare and low-frequency sequence variants on reliability of genomic prediction in dairy cattle
por: Zhang, Qianqian, et al.
Publicado: (2018)

Runs of Homozygosity and NetView analyses provide new insight into the genome-wide diversity and admixture of three German cattle breeds
por: Addo, Sowah, et al.
Publicado: (2019)

Ultra-deep sequencing of VHSV isolates contributes to understanding the role of viral quasispecies
por: Schönherz, Anna A., et al.
Publicado: (2016)

Exploring the Origin and Relatedness of Maternal Lineages Through Analysis of Mitochondrial DNA in the Holstein Horse
por: Engel, Laura, et al.
Publicado: (2021)

A 0.5-Mbp deletion on bovine chromosome 23 is a strong candidate for stillbirth in Nordic Red cattle
por: Sahana, Goutam, et al.
Publicado: (2016)

Effects of the Breeding Strategy Beef-on-Dairy at Animal, Farm and Sector Levels
por: Ahmed, Rana Hamas, et al.
Publicado: (2023)

Runs of homozygosity and distribution of functional variants in the cattle genome
por: Zhang, Qianqian, et al.
Publicado: (2015)

Loci associated with adult stature also affect calf birth survival in cattle
por: Sahana, Goutam, et al.
Publicado: (2015)

Analyzes of genome-wide association follow-up study for calving traits in dairy cattle
por: Höglund, Johanna K, et al.
Publicado: (2012)

Conservation status and historical relatedness of Italian cattle breeds
por: Mastrangelo, Salvatore, et al.
Publicado: (2018)

Genomic relatedness and diversity of Swedish native cattle breeds
por: Upadhyay, Maulik, et al.
Publicado: (2019)

Impact of kinship matrices on genetic gain and inbreeding with optimum contribution selection in a genomic dairy cattle breeding program
por: Gautason, Egill, et al.
Publicado: (2023)

Prioritizing candidate genes post-GWAS using multiple sources of data for mastitis resistance in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2018)

Weighting sequence variants based on their annotation increases the power of genome-wide association studies in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2019)

Streptococcus agalactiae Serotype IV in Humans and Cattle, Northern Europe
por: Lyhs, Ulrike, et al.
Publicado: (2016)

Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2018)

Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2019)

Comparison of gene-based rare variant association mapping methods for quantitative traits in a bovine population with complex familial relationships
por: Zhang, Qianqian, et al.
Publicado: (2016)

Factors affecting accuracy of estimated effective number of chromosome segments for numerically small breeds
por: Marjanovic, Jovana, et al.
Publicado: (2020)

Retraction Note: Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2018)

Genetic diversity and the application of runs of homozygosity-based methods for inbreeding estimation in German White-headed Mutton sheep
por: Addo, Sowah, et al.
Publicado: (2021)

Novel Harmful Recessive Haplotypes Identified for Fertility Traits in Nordic Holstein Cattle
por: Sahana, Goutam, et al.
Publicado: (2013)

Using Sequence Variants in Linkage Disequilibrium with Causative Mutations to Improve Across-Breed Prediction in Dairy Cattle: A Simulation Study
por: van den Berg, Irene, et al.
Publicado: (2016)

Distinguishing pleiotropy from linked QTL between milk production traits and mastitis resistance in Nordic Holstein cattle
por: Cai, Zexi, et al.
Publicado: (2020)

Strategies for imputation to whole genome sequence using a single or multi-breed reference population in cattle
por: Brøndum, Rasmus Froberg, et al.
Publicado: (2014)

Genome-wide mapping of large deletions and their population-genetic properties in dairy cattle
por: Mesbah-Uddin, Md, et al.
Publicado: (2018)

Predictors of Grandparental Investment Decisions in Contemporary Europe: Biological Relatedness and Beyond
por: Coall, David A., et al.
Publicado: (2014)

Genome-wide association mapping for dominance effects in female fertility using real and simulated data from Danish Holstein cattle
por: Mao, Xiaowei, et al.
Publicado: (2020)

A Meta-Analysis Including Pre-selected Sequence Variants Associated With Seven Traits in Three French Dairy Cattle Populations
por: Marete, Andrew G., et al.
Publicado: (2018)

Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants
por: Iso-Touru, T., et al.
Publicado: (2016)

Dealing with complexity of new phenotypes in modern dairy cattle breeding
por: Seidel, Anita, et al.
Publicado: (2020)

A splice donor variant in CCDC189 is associated with asthenospermia in Nordic Red dairy cattle
por: Iso-Touru, Terhi, et al.
Publicado: (2019)

Fine mapping QTL for female fertility on BTA04 and BTA13 in dairy cattle using HD SNP and sequence data
por: Höglund, Johanna K, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_l2bkuk2l2ol4oevscdenu9p3fb