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A field strength independent MR radiomics model to predict pathological complete response in locally advanced rectal cancer
PURPOSE: Aim of this study was to develop a generalised radiomics model for predicting pathological complete response after neoadjuvant chemo-radiotherapy in locally advanced rectal cancer patients using pre-CRT T2-weighted images acquired at a 1.5 T and a 3 T scanner. METHODS: In two institutions,...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Milan
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7937600/ https://www.ncbi.nlm.nih.gov/pubmed/32833198 http://dx.doi.org/10.1007/s11547-020-01266-z |
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author | Cusumano, Davide Meijer, Gert Lenkowicz, Jacopo Chiloiro, Giuditta Boldrini, Luca Masciocchi, Carlotta Dinapoli, Nicola Gatta, Roberto Casà, Calogero Damiani, Andrea Barbaro, Brunella Gambacorta, Maria Antonietta Azario, Luigi De Spirito, Marco Intven, Martijn Valentini, Vincenzo |
author_facet | Cusumano, Davide Meijer, Gert Lenkowicz, Jacopo Chiloiro, Giuditta Boldrini, Luca Masciocchi, Carlotta Dinapoli, Nicola Gatta, Roberto Casà, Calogero Damiani, Andrea Barbaro, Brunella Gambacorta, Maria Antonietta Azario, Luigi De Spirito, Marco Intven, Martijn Valentini, Vincenzo |
author_sort | Cusumano, Davide |
collection | PubMed |
description | PURPOSE: Aim of this study was to develop a generalised radiomics model for predicting pathological complete response after neoadjuvant chemo-radiotherapy in locally advanced rectal cancer patients using pre-CRT T2-weighted images acquired at a 1.5 T and a 3 T scanner. METHODS: In two institutions, 195 patients were scanned: 136 patients were scanned on a 1.5 T MR scanner, 59 patients on a 3 T MR scanner. Gross tumour volumes were delineated on the MR images and 496 radiomic features were extracted, applying the intensity-based (IB) filter. Features were standardised with Z-score normalisation and an initial feature selection was carried out using Wilcoxon–Mann–Whitney test: The most significant features at 1.5 T and 3 T were selected as main features. Several logistic regression models combining the main features with a third one selected by those resulting significant were elaborated and evaluated in terms of area under curve (AUC). A tenfold cross-validation was repeated 300 times to evaluate the model robustness. RESULTS: Three features were selected: maximum fractal dimension with IB = 0–50, energy and grey-level non-uniformity calculated on the run-length matrix with IB = 0–50. The AUC of the model applied to the whole dataset after cross-validation was 0.72, while values of 0.70 and 0.83 were obtained when 1.5 T and 3 T patients were considered, respectively. CONCLUSIONS: The model elaborated showed good performance, even when data from patients scanned on 1.5 T and 3 T were merged. This shows that magnetic field intensity variability can be overcome by means of selecting appropriate image features. |
format | Online Article Text |
id | pubmed-7937600 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer Milan |
record_format | MEDLINE/PubMed |
spelling | pubmed-79376002021-03-21 A field strength independent MR radiomics model to predict pathological complete response in locally advanced rectal cancer Cusumano, Davide Meijer, Gert Lenkowicz, Jacopo Chiloiro, Giuditta Boldrini, Luca Masciocchi, Carlotta Dinapoli, Nicola Gatta, Roberto Casà, Calogero Damiani, Andrea Barbaro, Brunella Gambacorta, Maria Antonietta Azario, Luigi De Spirito, Marco Intven, Martijn Valentini, Vincenzo Radiol Med Magnetic Resonance Imaging PURPOSE: Aim of this study was to develop a generalised radiomics model for predicting pathological complete response after neoadjuvant chemo-radiotherapy in locally advanced rectal cancer patients using pre-CRT T2-weighted images acquired at a 1.5 T and a 3 T scanner. METHODS: In two institutions, 195 patients were scanned: 136 patients were scanned on a 1.5 T MR scanner, 59 patients on a 3 T MR scanner. Gross tumour volumes were delineated on the MR images and 496 radiomic features were extracted, applying the intensity-based (IB) filter. Features were standardised with Z-score normalisation and an initial feature selection was carried out using Wilcoxon–Mann–Whitney test: The most significant features at 1.5 T and 3 T were selected as main features. Several logistic regression models combining the main features with a third one selected by those resulting significant were elaborated and evaluated in terms of area under curve (AUC). A tenfold cross-validation was repeated 300 times to evaluate the model robustness. RESULTS: Three features were selected: maximum fractal dimension with IB = 0–50, energy and grey-level non-uniformity calculated on the run-length matrix with IB = 0–50. The AUC of the model applied to the whole dataset after cross-validation was 0.72, while values of 0.70 and 0.83 were obtained when 1.5 T and 3 T patients were considered, respectively. CONCLUSIONS: The model elaborated showed good performance, even when data from patients scanned on 1.5 T and 3 T were merged. This shows that magnetic field intensity variability can be overcome by means of selecting appropriate image features. Springer Milan 2020-08-24 2021 /pmc/articles/PMC7937600/ /pubmed/32833198 http://dx.doi.org/10.1007/s11547-020-01266-z Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Magnetic Resonance Imaging Cusumano, Davide Meijer, Gert Lenkowicz, Jacopo Chiloiro, Giuditta Boldrini, Luca Masciocchi, Carlotta Dinapoli, Nicola Gatta, Roberto Casà, Calogero Damiani, Andrea Barbaro, Brunella Gambacorta, Maria Antonietta Azario, Luigi De Spirito, Marco Intven, Martijn Valentini, Vincenzo A field strength independent MR radiomics model to predict pathological complete response in locally advanced rectal cancer |
title | A field strength independent MR radiomics model to predict pathological complete response in locally advanced rectal cancer |
title_full | A field strength independent MR radiomics model to predict pathological complete response in locally advanced rectal cancer |
title_fullStr | A field strength independent MR radiomics model to predict pathological complete response in locally advanced rectal cancer |
title_full_unstemmed | A field strength independent MR radiomics model to predict pathological complete response in locally advanced rectal cancer |
title_short | A field strength independent MR radiomics model to predict pathological complete response in locally advanced rectal cancer |
title_sort | field strength independent mr radiomics model to predict pathological complete response in locally advanced rectal cancer |
topic | Magnetic Resonance Imaging |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7937600/ https://www.ncbi.nlm.nih.gov/pubmed/32833198 http://dx.doi.org/10.1007/s11547-020-01266-z |
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