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Rapid screening of UPB1 gene variations by high resolution melting curve analysis

The present study aimed to analyze gene mutations in patients with β-ureidopropinoase deficiency and establish a rapid detection method for β-ureidopropinoase (UPB1) pathogenic variations by high resolution melting (HRM) analysis. DNA samples with known UPB1 mutations in three patients with β-ureido...

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Autores principales: Xu, Xiaowei, Zheng, Jie, Zou, Qianqian, Wang, Chao, Zhang, Xinjie, Wang, Xuetao, Liu, Yang, Shu, Jianbo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7938451/
https://www.ncbi.nlm.nih.gov/pubmed/33692834
http://dx.doi.org/10.3892/etm.2021.9834
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author Xu, Xiaowei
Zheng, Jie
Zou, Qianqian
Wang, Chao
Zhang, Xinjie
Wang, Xuetao
Liu, Yang
Shu, Jianbo
author_facet Xu, Xiaowei
Zheng, Jie
Zou, Qianqian
Wang, Chao
Zhang, Xinjie
Wang, Xuetao
Liu, Yang
Shu, Jianbo
author_sort Xu, Xiaowei
collection PubMed
description The present study aimed to analyze gene mutations in patients with β-ureidopropinoase deficiency and establish a rapid detection method for β-ureidopropinoase (UPB1) pathogenic variations by high resolution melting (HRM) analysis. DNA samples with known UPB1 mutations in three patients with β-ureidopropinoase deficiency were utilized to establish a rapid detection method for UPB1 pathogenic variations by HRM analysis. Further rapid screening was performed on two patients diagnosed with β-ureidopropinoase deficiency and 50 healthy control individuals. The results showed that all known UPB1 gene mutations can be analyzed by a specially designed HRM assay. Each mutation has specific HRM profiles which could be used in rapid screening. The HRM method could correctly identify all genetic mutations in two children with β-ureidopropinoase deficiency. In addition, the HRM assay also recognized four unknown mutations. To conclude, the results support future studies of applying HRM analysis as a diagnostic approach for β-ureidopropinoase deficiency and a rapid screening method for UPB1 mutation carriers.
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spelling pubmed-79384512021-03-09 Rapid screening of UPB1 gene variations by high resolution melting curve analysis Xu, Xiaowei Zheng, Jie Zou, Qianqian Wang, Chao Zhang, Xinjie Wang, Xuetao Liu, Yang Shu, Jianbo Exp Ther Med Articles The present study aimed to analyze gene mutations in patients with β-ureidopropinoase deficiency and establish a rapid detection method for β-ureidopropinoase (UPB1) pathogenic variations by high resolution melting (HRM) analysis. DNA samples with known UPB1 mutations in three patients with β-ureidopropinoase deficiency were utilized to establish a rapid detection method for UPB1 pathogenic variations by HRM analysis. Further rapid screening was performed on two patients diagnosed with β-ureidopropinoase deficiency and 50 healthy control individuals. The results showed that all known UPB1 gene mutations can be analyzed by a specially designed HRM assay. Each mutation has specific HRM profiles which could be used in rapid screening. The HRM method could correctly identify all genetic mutations in two children with β-ureidopropinoase deficiency. In addition, the HRM assay also recognized four unknown mutations. To conclude, the results support future studies of applying HRM analysis as a diagnostic approach for β-ureidopropinoase deficiency and a rapid screening method for UPB1 mutation carriers. D.A. Spandidos 2021-04 2021-02-25 /pmc/articles/PMC7938451/ /pubmed/33692834 http://dx.doi.org/10.3892/etm.2021.9834 Text en Copyright: © Xu et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Xu, Xiaowei
Zheng, Jie
Zou, Qianqian
Wang, Chao
Zhang, Xinjie
Wang, Xuetao
Liu, Yang
Shu, Jianbo
Rapid screening of UPB1 gene variations by high resolution melting curve analysis
title Rapid screening of UPB1 gene variations by high resolution melting curve analysis
title_full Rapid screening of UPB1 gene variations by high resolution melting curve analysis
title_fullStr Rapid screening of UPB1 gene variations by high resolution melting curve analysis
title_full_unstemmed Rapid screening of UPB1 gene variations by high resolution melting curve analysis
title_short Rapid screening of UPB1 gene variations by high resolution melting curve analysis
title_sort rapid screening of upb1 gene variations by high resolution melting curve analysis
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7938451/
https://www.ncbi.nlm.nih.gov/pubmed/33692834
http://dx.doi.org/10.3892/etm.2021.9834
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