Cargando…

Genome-wide association analysis identified both RNA-seq and DNA variants associated to paratuberculosis in Canadian Holstein cattle ‘in vitro’ experimentally infected macrophages

BACKGROUND: Mycobacterium avium ssp. paratuberculosis (MAP) is the causative agent of paratuberculosis, or Johne’s disease (JD), an incurable bovine disease. The evidence for susceptibility to MAP disease points to multiple interacting factors, including the genetic predisposition to a dysregulation...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ariel, Olivier, Brouard, Jean-Simon, Marete, Andrew, Miglior, Filippo, Ibeagha-Awemu, Eveline, Bissonnette, Nathalie
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2021
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7938594/ https://www.ncbi.nlm.nih.gov/pubmed/33678157 http://dx.doi.org/10.1186/s12864-021-07487-4

Ejemplares similares

Identification of Long Non-coding RNA Isolated From Naturally Infected Macrophages and Associated With Bovine Johne's Disease in Canadian Holstein Using a Combination of Neural Networks and Logistic Regression
por: Marete, Andrew, et al.
Publicado: (2021)

Whole Genome DNA Methylation Variations in Mammary Gland Tissues from Holstein Cattle Producing Milk with Various Fat and Protein Contents
por: Wang, Mengqi, et al.
Publicado: (2021)

Transcriptome Profiling of Bovine Macrophages Infected by Mycobacterium avium spp. paratuberculosis Depicts Foam Cell and Innate Immune Tolerance Phenotypes
por: Ariel, Olivier, et al.
Publicado: (2020)

Associations between variants of FADS genes and omega-3 and omega-6 milk fatty acids of Canadian Holstein cows
por: Ibeagha-Awemu, Eveline M, et al.
Publicado: (2014)

Low-depth genotyping-by-sequencing (GBS) in a bovine population: strategies to maximize the selection of high quality genotypes and the accuracy of imputation
por: Brouard, Jean-Simon, et al.
Publicado: (2017)

A genome-wide association study of immune response traits in Canadian Holstein cattle
por: Thompson-Crispi, Kathleen A, et al.
Publicado: (2014)

Genome wide association study identifies novel potential candidate genes for bovine milk cholesterol content
por: Do, Duy N., et al.
Publicado: (2018)

Whole Genome Methylation Analysis Reveals Role of DNA Methylation in Cow’s Ileal and Ileal Lymph Node Responses to Mycobacterium avium subsp. paratuberculosis Infection
por: Ibeagha-Awemu, Eveline M., et al.
Publicado: (2021)

Regionally Distinct Immune and Metabolic Transcriptional Responses in the Bovine Small Intestine and Draining Lymph Nodes During a Subclinical Mycobacterium avium subsp. paratuberculosis Infection
por: Ibeagha-Awemu, Eveline M., et al.
Publicado: (2021)

Non-additive genetic effects for fertility traits in Canadian Holstein cattle (Open Access publication )
por: Palucci, Valentina, et al.
Publicado: (2007)

The GATK joint genotyping workflow is appropriate for calling variants in RNA-seq experiments
por: Brouard, Jean-Simon, et al.
Publicado: (2019)

A critical analysis of disease-associated DNA polymorphisms in the genes of cattle, goat, sheep, and pig
por: Ibeagha-Awemu, Eveline M., et al.
Publicado: (2008)

Genetic Association Analysis of Paratuberculosis Forms in Holstein-Friesian Cattle
por: Vázquez, Patricia, et al.
Publicado: (2014)

Effect of recent and ancient inbreeding on production and fertility traits in Canadian Holsteins
por: Makanjuola, Bayode O., et al.
Publicado: (2020)

Co-Expression Network Analysis Identifies miRNA–mRNA Networks Potentially Regulating Milk Traits and Blood Metabolites
por: Ammah, Adolf A., et al.
Publicado: (2018)

Transcriptome Analysis of Long Non-Coding RNA in the Bovine Mammary Gland Following Dietary Supplementation with Linseed Oil and Safflower Oil
por: Ibeagha-Awemu, Eveline M., et al.
Publicado: (2018)

A comprehensive characterization of longevity and culling reasons in Canadian Holstein cattle based on various systematic factors
por: de Souza, Taiana Cortez, et al.
Publicado: (2023)

Genome-Wide Association Study of Susceptibility to Infection by Mycobacterium avium Subspecies paratuberculosis in Holstein Cattle
por: Alpay, Fazli, et al.
Publicado: (2014)

Genetic diversity, introgression and relationships among West/Central African cattle breeds
por: Ibeagha-Awemu, Eveline Mengwi, et al.
Publicado: (2004)

Integration of lncRNA and mRNA Transcriptome Analyses Reveals Genes and Pathways Potentially Involved in Calf Intestinal Growth and Development during the Early Weeks of Life
por: Ibeagha-Awemu, Eveline M., et al.
Publicado: (2018)

Association of genetic polymorphisms related to Johne’s disease with estimated breeding values of Holstein sires for milk ELISA test scores
por: Mallikarjunappa, Sanjay, et al.
Publicado: (2020)

Genome-Wide DNA Methylation and Transcriptome Integration Associates DNA Methylation Changes with Bovine Subclinical Mastitis Caused by Staphylococcus chromogenes
por: Wang, Mengqi, et al.
Publicado: (2023)

Genome-Wide Association Study for Milk Fatty Acids in Holstein Cattle Accounting for the DGAT1 Gene Effect
por: Cruz, Valdecy A. R., et al.
Publicado: (2019)

Identification of unique ROH regions with unfavorable effects on production and fertility traits in Canadian Holsteins
por: Makanjuola, Bayode O., et al.
Publicado: (2021)

Genome-wide association analysis for β-hydroxybutyrate concentration in Milk in Holstein dairy cattle
por: Nayeri, S., et al.
Publicado: (2019)

Genetic differentiation of Mexican Holstein cattle and its relationship with Canadian and U.S. Holsteins
por: García-Ruiz, Adriana, et al.
Publicado: (2015)

Genetic Analysis of Methane Emission Traits in Holstein Dairy Cattle
por: Kamalanathan, Stephanie, et al.
Publicado: (2023)

Transcriptome adaptation of the bovine mammary gland to diets rich in unsaturated fatty acids shows greater impact of linseed oil over safflower oil on gene expression and metabolic pathways
por: Ibeagha-Awemu, Eveline M., et al.
Publicado: (2016)

The influence of different anticoagulants and sample preparation methods on measurement of mCD14 on bovine monocytes and polymorphonuclear neutrophil leukocytes
por: Ibeagha-Awemu, Eveline M, et al.
Publicado: (2012)

Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
por: Li, Ran, et al.
Publicado: (2015)

Epigenetic marks: regulators of livestock phenotypes and conceivable sources of missing variation in livestock improvement programs
por: Ibeagha-Awemu, Eveline M., et al.
Publicado: (2015)

Modeling of livestock systems to enhance efficiency
por: McKnight, Leslie, et al.
Publicado: (2019)

Impacts of Epigenetic Processes on the Health and Productivity of Livestock
por: Wang, Mengqi, et al.
Publicado: (2021)

New insights into the genetic resistance to paratuberculosis in Holstein cattle via single-step genomic evaluation
por: Sanchez, Marie-Pierre, et al.
Publicado: (2022)

Genomic epidemiology of Mycobacterium avium subsp. paratuberculosis isolates from Canadian dairy herds provides evidence for multiple infection events
por: Byrne, Alexander, et al.
Publicado: (2023)

Milk fatty acid variability and association with polymorphisms in SCD1 and DGAT1 genes in White Fulani and Borgou cattle breeds
por: Houaga, Isidore, et al.
Publicado: (2018)

Direct-fed microbial supplementation influences the bacteria community composition of the gastrointestinal tract of pre- and post-weaned calves
por: Fomenky, Bridget E., et al.
Publicado: (2018)

Genome-Wide DNA Methylation Analysis of Mammary Gland Tissues From Chinese Holstein Cows With Staphylococcus aureus Induced Mastitis
por: Wang, Mengqi, et al.
Publicado: (2020)

Genome-wide association for milk production and female fertility traits in Canadian dairy Holstein cattle
por: Nayeri, Shadi, et al.
Publicado: (2016)

Identification of loci associated with pathological outcomes in Holstein cattle infected with Mycobacterium avium subsp. paratuberculosis using whole-genome sequence data
por: Canive, Maria, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_64um7ksko4e4juab5dtcer0ig9