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Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain

Distinct types of dorsal root ganglion sensory neurons may have unique contributions to chronic pain. Identification of primate sensory neuron types is critical for understanding the cellular origin and heritability of chronic pain. However, molecular insights into the primate sensory neurons are mi...

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Autores principales: Kupari, Jussi, Usoskin, Dmitry, Parisien, Marc, Lou, Daohua, Hu, Yizhou, Fatt, Michael, Lönnerberg, Peter, Spångberg, Mats, Eriksson, Bengt, Barkas, Nikolaos, Kharchenko, Peter V., Loré, Karin, Khoury, Samar, Diatchenko, Luda, Ernfors, Patrik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7940623/
https://www.ncbi.nlm.nih.gov/pubmed/33686078
http://dx.doi.org/10.1038/s41467-021-21725-z
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author Kupari, Jussi
Usoskin, Dmitry
Parisien, Marc
Lou, Daohua
Hu, Yizhou
Fatt, Michael
Lönnerberg, Peter
Spångberg, Mats
Eriksson, Bengt
Barkas, Nikolaos
Kharchenko, Peter V.
Loré, Karin
Khoury, Samar
Diatchenko, Luda
Ernfors, Patrik
author_facet Kupari, Jussi
Usoskin, Dmitry
Parisien, Marc
Lou, Daohua
Hu, Yizhou
Fatt, Michael
Lönnerberg, Peter
Spångberg, Mats
Eriksson, Bengt
Barkas, Nikolaos
Kharchenko, Peter V.
Loré, Karin
Khoury, Samar
Diatchenko, Luda
Ernfors, Patrik
author_sort Kupari, Jussi
collection PubMed
description Distinct types of dorsal root ganglion sensory neurons may have unique contributions to chronic pain. Identification of primate sensory neuron types is critical for understanding the cellular origin and heritability of chronic pain. However, molecular insights into the primate sensory neurons are missing. Here we classify non-human primate dorsal root ganglion sensory neurons based on their transcriptome and map human pain heritability to neuronal types. First, we identified cell correlates between two major datasets for mouse sensory neuron types. Machine learning exposes an overall cross-species conservation of somatosensory neurons between primate and mouse, although with differences at individual gene level, highlighting the importance of primate data for clinical translation. We map genomic loci associated with chronic pain in human onto primate sensory neuron types to identify the cellular origin of chronic pain. Genome-wide associations for chronic pain converge on two different neuronal types distributed between pain disorders that display different genetic susceptibilities, suggesting both unique and shared mechanisms between different pain conditions.
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spelling pubmed-79406232021-03-28 Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain Kupari, Jussi Usoskin, Dmitry Parisien, Marc Lou, Daohua Hu, Yizhou Fatt, Michael Lönnerberg, Peter Spångberg, Mats Eriksson, Bengt Barkas, Nikolaos Kharchenko, Peter V. Loré, Karin Khoury, Samar Diatchenko, Luda Ernfors, Patrik Nat Commun Article Distinct types of dorsal root ganglion sensory neurons may have unique contributions to chronic pain. Identification of primate sensory neuron types is critical for understanding the cellular origin and heritability of chronic pain. However, molecular insights into the primate sensory neurons are missing. Here we classify non-human primate dorsal root ganglion sensory neurons based on their transcriptome and map human pain heritability to neuronal types. First, we identified cell correlates between two major datasets for mouse sensory neuron types. Machine learning exposes an overall cross-species conservation of somatosensory neurons between primate and mouse, although with differences at individual gene level, highlighting the importance of primate data for clinical translation. We map genomic loci associated with chronic pain in human onto primate sensory neuron types to identify the cellular origin of chronic pain. Genome-wide associations for chronic pain converge on two different neuronal types distributed between pain disorders that display different genetic susceptibilities, suggesting both unique and shared mechanisms between different pain conditions. Nature Publishing Group UK 2021-03-08 /pmc/articles/PMC7940623/ /pubmed/33686078 http://dx.doi.org/10.1038/s41467-021-21725-z Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kupari, Jussi
Usoskin, Dmitry
Parisien, Marc
Lou, Daohua
Hu, Yizhou
Fatt, Michael
Lönnerberg, Peter
Spångberg, Mats
Eriksson, Bengt
Barkas, Nikolaos
Kharchenko, Peter V.
Loré, Karin
Khoury, Samar
Diatchenko, Luda
Ernfors, Patrik
Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain
title Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain
title_full Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain
title_fullStr Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain
title_full_unstemmed Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain
title_short Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain
title_sort single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7940623/
https://www.ncbi.nlm.nih.gov/pubmed/33686078
http://dx.doi.org/10.1038/s41467-021-21725-z
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