Cargando…

Pi-starvation induced transcriptional changes in barley revealed by a comprehensive RNA-Seq and degradome analyses

BACKGROUND: Small RNAs (sRNAs) are 20–30 nt regulatory elements which are responsible for plant development regulation and participate in many plant stress responses. Insufficient inorganic phosphate (Pi) concentration triggers plant responses to balance the internal Pi level. RESULTS: In this study...

Descripción completa

Detalles Bibliográficos
Autores principales:	Sega, Pawel, Kruszka, Katarzyna, Bielewicz, Dawid, Karlowski, Wojciech, Nuc, Przemyslaw, Szweykowska-Kulinska, Zofia, Pacak, Andrzej
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2021
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7941915/ https://www.ncbi.nlm.nih.gov/pubmed/33750301 http://dx.doi.org/10.1186/s12864-021-07481-w

Ejemplares similares

MicroRNA172b-5p/trehalose-6-phosphate synthase module stimulates trehalose synthesis and microRNA172b-3p/AP2-like module accelerates flowering in barley upon drought stress
por: Swida-Barteczka, Aleksandra, et al.
Publicado: (2023)

Transcriptionally and post-transcriptionally regulated microRNAs in heat stress response in barley
por: Kruszka, Katarzyna, et al.
Publicado: (2014)

A Functional Network of Novel Barley MicroRNAs and Their Targets in Response to Drought
por: Smoczynska, Aleksandra, et al.
Publicado: (2020)

Heat Stress Affects Pi-related Genes Expression and Inorganic Phosphate Deposition/Accumulation in Barley
por: Pacak, Andrzej, et al.
Publicado: (2016)

Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses
por: Barciszewska-Pacak, Maria, et al.
Publicado: (2015)

Developmentally regulated expression and complex processing of barley pri-microRNAs
por: Kruszka, Katarzyna, et al.
Publicado: (2013)

Excess nitrogen responsive HvMADS27 transcription factor controls barley root architecture by regulating abscisic acid level
por: Smoczynska, Aleksandra, et al.
Publicado: (2022)

A Role of U12 Intron in Proper Pre-mRNA Splicing of Plant Cap Binding Protein 20 Genes
por: Pieczynski, Marcin, et al.
Publicado: (2018)

Corrigendum: A Role of U12 Intron in Proper Pre-mRNA Splicing of Plant Cap Binding Protein 20 Genes
por: Pieczynski, Marcin, et al.
Publicado: (2019)

The Role of the P1BS Element Containing Promoter-Driven Genes in Pi Transport and Homeostasis in Plants
por: Sobkowiak, Lukasz, et al.
Publicado: (2012)

mirEX 2.0 - an integrated environment for expression profiling of plant microRNAs
por: Zielezinski, Andrzej, et al.
Publicado: (2015)

MicroRNA biogenesis and activity in plant cell dedifferentiation stimulated by cell wall removal
por: Dełeńko, Konrad, et al.
Publicado: (2022)

The liverwort Pellia endiviifolia shares microtranscriptomic traits that are common to green algae and land plants
por: Alaba, Sylwia, et al.
Publicado: (2015)

A stable tRNA-like molecule is generated from the long noncoding RNA GUT15 in Arabidopsis
por: Plewka, Patrycja, et al.
Publicado: (2018)

mirEX: a platform for comparative exploration of plant pri-miRNA expression data
por: Bielewicz, Dawid, et al.
Publicado: (2012)

The identification of differentially expressed genes in male and female gametophytes of simple thalloid liverwort Pellia endiviifolia sp. B using an RNA-seq approach
por: Sierocka, Izabela, et al.
Publicado: (2020)

Non-Canonical Processing of Arabidopsis pri-miR319a/b/c Generates Additional microRNAs to Target One RAP2.12 mRNA Isoform
por: Sobkowiak, Lukasz, et al.
Publicado: (2012)

N(6)-methyladenosine (m(6)A): Revisiting the Old with Focus on New, an Arabidopsis thaliana Centered Review
por: Bhat, Susheel Sagar, et al.
Publicado: (2018)

Promoter-based identification of novel non-coding RNAs reveals the presence of dicistronic snoRNA-miRNA genes in Arabidopsis thaliana
por: Qu, Ge, et al.
Publicado: (2015)

Active 5΄ splice sites regulate the biogenesis efficiency of Arabidopsis microRNAs derived from intron-containing genes
por: Knop, Katarzyna, et al.
Publicado: (2017)

miR393 Is Required for Production of Proper Auxin Signalling Outputs
por: Windels, David, et al.
Publicado: (2014)

Regulation of Plant Microprocessor Function in Shaping microRNA Landscape
por: Dolata, Jakub, et al.
Publicado: (2018)

Mutation in HvCBP20 (Cap Binding Protein 20) Adapts Barley to Drought Stress at Phenotypic and Transcriptomic Levels
por: Daszkowska-Golec, Agata, et al.
Publicado: (2017)

Introns of plant pri-miRNAs enhance miRNA biogenesis
por: Bielewicz, Dawid, et al.
Publicado: (2013)

Biogenesis, conservation, and function of miRNA in liverworts
por: Pietrykowska, Halina, et al.
Publicado: (2022)

MicroRNAs Are Intensively Regulated during Induction of Somatic Embryogenesis in Arabidopsis
por: Szyrajew, Katarzyna, et al.
Publicado: (2017)

Chromatin-associated microprocessor assembly is regulated by the U1 snRNP auxiliary protein PRP40
por: Stepien, Agata, et al.
Publicado: (2022)

Genomewide identification of genes involved in the potato response to drought indicates functional evolutionary conservation with Arabidopsis plants
por: Pieczynski, Marcin, et al.
Publicado: (2017)

The MYB33, MYB65, and MYB101 transcription factors affect Arabidopsis and potato responses to drought by regulating the ABA signaling pathway
por: Wyrzykowska, Anna, et al.
Publicado: (2022)

SERRATE interacts with the nuclear exosome targeting (NEXT) complex to degrade primary miRNA precursors in Arabidopsis
por: Bajczyk, Mateusz, et al.
Publicado: (2020)

Hyponastic Leaves 1 Interacts with RNA Pol II to Ensure Proper Transcription of MicroRNA Genes
por: Bielewicz, Dawid, et al.
Publicado: (2023)

Plant PHR Transcription Factors: Put on A Map
por: Sega, Paweł, et al.
Publicado: (2019)

Recent Insights into Plant miRNA Biogenesis: Multiple Layers of miRNA Level Regulation
por: Bajczyk, Mateusz, et al.
Publicado: (2023)

Micromanagement of Developmental and Stress-Induced Senescence: The Emerging Role of MicroRNAs
por: Swida-Barteczka, Aleksandra, et al.
Publicado: (2019)

Maf1-mediated regulation of yeast RNA polymerase III is correlated with CCA addition at the 3′ end of tRNA precursors
por: Foretek, Dominika, et al.
Publicado: (2017)

piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing
por: Han, Bo W., et al.
Publicado: (2015)

The expanding role of RNA modifications in plant RNA polymerase II transcripts: highlights and perspectives
por: Zimna, Marta, et al.
Publicado: (2023)

High-throughput sequencing identification of novel and conserved miRNAs in the Brassica oleracea leaves
por: Lukasik, Anna, et al.
Publicado: (2013)

RNA degradome—its biogenesis and functions
por: Jackowiak, Paulina, et al.
Publicado: (2011)

Annotation and profiling of barley GLYCOGEN SYNTHASE3/Shaggy-like genes indicated shift in organ-preferential expression
por: Groszyk, Jolanta, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_jdcdm8btrl4vmueffbk99jlodq