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Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics

Outbreaks of SARS-CoV-2 are threatening the health care systems of several countries around the world. The initial control of SARS-CoV-2 epidemics relied on non-pharmaceutical interventions, such as social distancing, teleworking, mouth masks and contact tracing. However, as pre-symptomatic transmis...

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Autores principales: Libin, Pieter J. K., Willem, Lander, Verstraeten, Timothy, Torneri, Andrea, Vanderlocht, Joris, Hens, Niel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7943003/
https://www.ncbi.nlm.nih.gov/pubmed/33690626
http://dx.doi.org/10.1371/journal.pcbi.1008688
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author Libin, Pieter J. K.
Willem, Lander
Verstraeten, Timothy
Torneri, Andrea
Vanderlocht, Joris
Hens, Niel
author_facet Libin, Pieter J. K.
Willem, Lander
Verstraeten, Timothy
Torneri, Andrea
Vanderlocht, Joris
Hens, Niel
author_sort Libin, Pieter J. K.
collection PubMed
description Outbreaks of SARS-CoV-2 are threatening the health care systems of several countries around the world. The initial control of SARS-CoV-2 epidemics relied on non-pharmaceutical interventions, such as social distancing, teleworking, mouth masks and contact tracing. However, as pre-symptomatic transmission remains an important driver of the epidemic, contact tracing efforts struggle to fully control SARS-CoV-2 epidemics. Therefore, in this work, we investigate to what extent the use of universal testing, i.e., an approach in which we screen the entire population, can be utilized to mitigate this epidemic. To this end, we rely on PCR test pooling of individuals that belong to the same households, to allow for a universal testing procedure that is feasible with the limited testing capacity. We evaluate two isolation strategies: on the one hand pool isolation, where we isolate all individuals that belong to a positive PCR test pool, and on the other hand individual isolation, where we determine which of the individuals that belong to the positive PCR pool are positive, through an additional testing step. We evaluate this universal testing approach in the STRIDE individual-based epidemiological model in the context of the Belgian COVID-19 epidemic. As the organisation of universal testing will be challenging, we discuss the different aspects related to sample extraction and PCR testing, to demonstrate the feasibility of universal testing when a decentralized testing approach is used. We show through simulation, that weekly universal testing is able to control the epidemic, even when many of the contact reductions are relieved. Finally, our model shows that the use of universal testing in combination with stringent contact reductions could be considered as a strategy to eradicate the virus.
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spelling pubmed-79430032021-03-19 Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics Libin, Pieter J. K. Willem, Lander Verstraeten, Timothy Torneri, Andrea Vanderlocht, Joris Hens, Niel PLoS Comput Biol Research Article Outbreaks of SARS-CoV-2 are threatening the health care systems of several countries around the world. The initial control of SARS-CoV-2 epidemics relied on non-pharmaceutical interventions, such as social distancing, teleworking, mouth masks and contact tracing. However, as pre-symptomatic transmission remains an important driver of the epidemic, contact tracing efforts struggle to fully control SARS-CoV-2 epidemics. Therefore, in this work, we investigate to what extent the use of universal testing, i.e., an approach in which we screen the entire population, can be utilized to mitigate this epidemic. To this end, we rely on PCR test pooling of individuals that belong to the same households, to allow for a universal testing procedure that is feasible with the limited testing capacity. We evaluate two isolation strategies: on the one hand pool isolation, where we isolate all individuals that belong to a positive PCR test pool, and on the other hand individual isolation, where we determine which of the individuals that belong to the positive PCR pool are positive, through an additional testing step. We evaluate this universal testing approach in the STRIDE individual-based epidemiological model in the context of the Belgian COVID-19 epidemic. As the organisation of universal testing will be challenging, we discuss the different aspects related to sample extraction and PCR testing, to demonstrate the feasibility of universal testing when a decentralized testing approach is used. We show through simulation, that weekly universal testing is able to control the epidemic, even when many of the contact reductions are relieved. Finally, our model shows that the use of universal testing in combination with stringent contact reductions could be considered as a strategy to eradicate the virus. Public Library of Science 2021-03-09 /pmc/articles/PMC7943003/ /pubmed/33690626 http://dx.doi.org/10.1371/journal.pcbi.1008688 Text en © 2021 Libin et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Libin, Pieter J. K.
Willem, Lander
Verstraeten, Timothy
Torneri, Andrea
Vanderlocht, Joris
Hens, Niel
Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics
title Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics
title_full Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics
title_fullStr Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics
title_full_unstemmed Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics
title_short Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics
title_sort assessing the feasibility and effectiveness of household-pooled universal testing to control covid-19 epidemics
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7943003/
https://www.ncbi.nlm.nih.gov/pubmed/33690626
http://dx.doi.org/10.1371/journal.pcbi.1008688
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