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Automatic lumbar spinal MRI image segmentation with a multi-scale attention network
Lumbar spinal stenosis (LSS) is a lumbar disease with a high incidence in recent years. Accurate segmentation of the vertebral body, lamina and dural sac is a key step in the diagnosis of LSS. This study presents an lumbar spine magnetic resonance imaging image segmentation method based on deep lear...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer London
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7945623/ https://www.ncbi.nlm.nih.gov/pubmed/33723476 http://dx.doi.org/10.1007/s00521-021-05856-4 |
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author | Li, Haixing Luo, Haibo Huan, Wang Shi, Zelin Yan, Chongnan Wang, Lanbo Mu, Yueming Liu, Yunpeng |
author_facet | Li, Haixing Luo, Haibo Huan, Wang Shi, Zelin Yan, Chongnan Wang, Lanbo Mu, Yueming Liu, Yunpeng |
author_sort | Li, Haixing |
collection | PubMed |
description | Lumbar spinal stenosis (LSS) is a lumbar disease with a high incidence in recent years. Accurate segmentation of the vertebral body, lamina and dural sac is a key step in the diagnosis of LSS. This study presents an lumbar spine magnetic resonance imaging image segmentation method based on deep learning. In addition, we define the quantitative evaluation methods of two clinical indicators (that is the anteroposterior diameter of the spinal canal and the cross-sectional area of the dural sac) to assist LSS diagnosis. To improve the segmentation performance, a dual-branch multi-scale attention module is embedded into the network. It contains multi-scale feature extraction based on three 3 × 3 convolution operators and vital information selection based on attention mechanism. In the experiment, we used lumbar datasets from the spine surgery department of Shengjing Hospital of China Medical University to evaluate the effect of the method embedded the dual-branch multi-scale attention module. Compared with other state-of-the-art methods, the average dice similarity coefficient was improved from 0.9008 to 0.9252 and the average surface distance was decreased from 6.40 to 2.71 mm. |
format | Online Article Text |
id | pubmed-7945623 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer London |
record_format | MEDLINE/PubMed |
spelling | pubmed-79456232021-03-11 Automatic lumbar spinal MRI image segmentation with a multi-scale attention network Li, Haixing Luo, Haibo Huan, Wang Shi, Zelin Yan, Chongnan Wang, Lanbo Mu, Yueming Liu, Yunpeng Neural Comput Appl Original Article Lumbar spinal stenosis (LSS) is a lumbar disease with a high incidence in recent years. Accurate segmentation of the vertebral body, lamina and dural sac is a key step in the diagnosis of LSS. This study presents an lumbar spine magnetic resonance imaging image segmentation method based on deep learning. In addition, we define the quantitative evaluation methods of two clinical indicators (that is the anteroposterior diameter of the spinal canal and the cross-sectional area of the dural sac) to assist LSS diagnosis. To improve the segmentation performance, a dual-branch multi-scale attention module is embedded into the network. It contains multi-scale feature extraction based on three 3 × 3 convolution operators and vital information selection based on attention mechanism. In the experiment, we used lumbar datasets from the spine surgery department of Shengjing Hospital of China Medical University to evaluate the effect of the method embedded the dual-branch multi-scale attention module. Compared with other state-of-the-art methods, the average dice similarity coefficient was improved from 0.9008 to 0.9252 and the average surface distance was decreased from 6.40 to 2.71 mm. Springer London 2021-03-10 2021 /pmc/articles/PMC7945623/ /pubmed/33723476 http://dx.doi.org/10.1007/s00521-021-05856-4 Text en © The Author(s), under exclusive licence to Springer-Verlag London Ltd., part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Original Article Li, Haixing Luo, Haibo Huan, Wang Shi, Zelin Yan, Chongnan Wang, Lanbo Mu, Yueming Liu, Yunpeng Automatic lumbar spinal MRI image segmentation with a multi-scale attention network |
title | Automatic lumbar spinal MRI image segmentation with a multi-scale attention network |
title_full | Automatic lumbar spinal MRI image segmentation with a multi-scale attention network |
title_fullStr | Automatic lumbar spinal MRI image segmentation with a multi-scale attention network |
title_full_unstemmed | Automatic lumbar spinal MRI image segmentation with a multi-scale attention network |
title_short | Automatic lumbar spinal MRI image segmentation with a multi-scale attention network |
title_sort | automatic lumbar spinal mri image segmentation with a multi-scale attention network |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7945623/ https://www.ncbi.nlm.nih.gov/pubmed/33723476 http://dx.doi.org/10.1007/s00521-021-05856-4 |
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