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Theory for the optimal detection of time-varying signals in cellular sensing systems

Living cells often need to measure chemical concentrations that vary in time, yet how accurately they can do so is poorly understood. Here, we present a theory that fully specifies, without any adjustable parameters, the optimal design of a canonical sensing system in terms of two elementary design...

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Detalles Bibliográficos
Autores principales: Malaguti, Giulia, ten Wolde, Pieter Rein
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7946427/
https://www.ncbi.nlm.nih.gov/pubmed/33594978
http://dx.doi.org/10.7554/eLife.62574
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author Malaguti, Giulia
ten Wolde, Pieter Rein
author_facet Malaguti, Giulia
ten Wolde, Pieter Rein
author_sort Malaguti, Giulia
collection PubMed
description Living cells often need to measure chemical concentrations that vary in time, yet how accurately they can do so is poorly understood. Here, we present a theory that fully specifies, without any adjustable parameters, the optimal design of a canonical sensing system in terms of two elementary design principles: (1) there exists an optimal integration time, which is determined by the input statistics and the number of receptors; and (2) in the optimally designed system, the number of independent concentration measurements as set by the number of receptors and the optimal integration time equals the number of readout molecules that store these measurements and equals the work to store these measurements reliably; no resource is then in excess and hence wasted. Applying our theory to the Escherichia coli chemotaxis system indicates that its integration time is not only optimal for sensing shallow gradients but also necessary to enable navigation in these gradients.
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spelling pubmed-79464272021-03-12 Theory for the optimal detection of time-varying signals in cellular sensing systems Malaguti, Giulia ten Wolde, Pieter Rein eLife Physics of Living Systems Living cells often need to measure chemical concentrations that vary in time, yet how accurately they can do so is poorly understood. Here, we present a theory that fully specifies, without any adjustable parameters, the optimal design of a canonical sensing system in terms of two elementary design principles: (1) there exists an optimal integration time, which is determined by the input statistics and the number of receptors; and (2) in the optimally designed system, the number of independent concentration measurements as set by the number of receptors and the optimal integration time equals the number of readout molecules that store these measurements and equals the work to store these measurements reliably; no resource is then in excess and hence wasted. Applying our theory to the Escherichia coli chemotaxis system indicates that its integration time is not only optimal for sensing shallow gradients but also necessary to enable navigation in these gradients. eLife Sciences Publications, Ltd 2021-02-17 /pmc/articles/PMC7946427/ /pubmed/33594978 http://dx.doi.org/10.7554/eLife.62574 Text en © 2021, Malaguti and ten Wolde http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Physics of Living Systems
Malaguti, Giulia
ten Wolde, Pieter Rein
Theory for the optimal detection of time-varying signals in cellular sensing systems
title Theory for the optimal detection of time-varying signals in cellular sensing systems
title_full Theory for the optimal detection of time-varying signals in cellular sensing systems
title_fullStr Theory for the optimal detection of time-varying signals in cellular sensing systems
title_full_unstemmed Theory for the optimal detection of time-varying signals in cellular sensing systems
title_short Theory for the optimal detection of time-varying signals in cellular sensing systems
title_sort theory for the optimal detection of time-varying signals in cellular sensing systems
topic Physics of Living Systems
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7946427/
https://www.ncbi.nlm.nih.gov/pubmed/33594978
http://dx.doi.org/10.7554/eLife.62574
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AT tenwoldepieterrein theoryfortheoptimaldetectionoftimevaryingsignalsincellularsensingsystems