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Theory for the optimal detection of time-varying signals in cellular sensing systems
Living cells often need to measure chemical concentrations that vary in time, yet how accurately they can do so is poorly understood. Here, we present a theory that fully specifies, without any adjustable parameters, the optimal design of a canonical sensing system in terms of two elementary design...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7946427/ https://www.ncbi.nlm.nih.gov/pubmed/33594978 http://dx.doi.org/10.7554/eLife.62574 |
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author | Malaguti, Giulia ten Wolde, Pieter Rein |
author_facet | Malaguti, Giulia ten Wolde, Pieter Rein |
author_sort | Malaguti, Giulia |
collection | PubMed |
description | Living cells often need to measure chemical concentrations that vary in time, yet how accurately they can do so is poorly understood. Here, we present a theory that fully specifies, without any adjustable parameters, the optimal design of a canonical sensing system in terms of two elementary design principles: (1) there exists an optimal integration time, which is determined by the input statistics and the number of receptors; and (2) in the optimally designed system, the number of independent concentration measurements as set by the number of receptors and the optimal integration time equals the number of readout molecules that store these measurements and equals the work to store these measurements reliably; no resource is then in excess and hence wasted. Applying our theory to the Escherichia coli chemotaxis system indicates that its integration time is not only optimal for sensing shallow gradients but also necessary to enable navigation in these gradients. |
format | Online Article Text |
id | pubmed-7946427 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-79464272021-03-12 Theory for the optimal detection of time-varying signals in cellular sensing systems Malaguti, Giulia ten Wolde, Pieter Rein eLife Physics of Living Systems Living cells often need to measure chemical concentrations that vary in time, yet how accurately they can do so is poorly understood. Here, we present a theory that fully specifies, without any adjustable parameters, the optimal design of a canonical sensing system in terms of two elementary design principles: (1) there exists an optimal integration time, which is determined by the input statistics and the number of receptors; and (2) in the optimally designed system, the number of independent concentration measurements as set by the number of receptors and the optimal integration time equals the number of readout molecules that store these measurements and equals the work to store these measurements reliably; no resource is then in excess and hence wasted. Applying our theory to the Escherichia coli chemotaxis system indicates that its integration time is not only optimal for sensing shallow gradients but also necessary to enable navigation in these gradients. eLife Sciences Publications, Ltd 2021-02-17 /pmc/articles/PMC7946427/ /pubmed/33594978 http://dx.doi.org/10.7554/eLife.62574 Text en © 2021, Malaguti and ten Wolde http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Physics of Living Systems Malaguti, Giulia ten Wolde, Pieter Rein Theory for the optimal detection of time-varying signals in cellular sensing systems |
title | Theory for the optimal detection of time-varying signals in cellular sensing systems |
title_full | Theory for the optimal detection of time-varying signals in cellular sensing systems |
title_fullStr | Theory for the optimal detection of time-varying signals in cellular sensing systems |
title_full_unstemmed | Theory for the optimal detection of time-varying signals in cellular sensing systems |
title_short | Theory for the optimal detection of time-varying signals in cellular sensing systems |
title_sort | theory for the optimal detection of time-varying signals in cellular sensing systems |
topic | Physics of Living Systems |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7946427/ https://www.ncbi.nlm.nih.gov/pubmed/33594978 http://dx.doi.org/10.7554/eLife.62574 |
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