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Exploring the effect of image enhancement techniques on COVID-19 detection using chest X-ray images
Computer-aided diagnosis for the reliable and fast detection of coronavirus disease (COVID-19) has become a necessity to prevent the spread of the virus during the pandemic to ease the burden on the healthcare system. Chest X-ray (CXR) imaging has several advantages over other imaging and detection...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier Ltd.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7946571/ https://www.ncbi.nlm.nih.gov/pubmed/33799220 http://dx.doi.org/10.1016/j.compbiomed.2021.104319 |
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author | Rahman, Tawsifur Khandakar, Amith Qiblawey, Yazan Tahir, Anas Kiranyaz, Serkan Abul Kashem, Saad Bin Islam, Mohammad Tariqul Al Maadeed, Somaya Zughaier, Susu M. Khan, Muhammad Salman Chowdhury, Muhammad E.H. |
author_facet | Rahman, Tawsifur Khandakar, Amith Qiblawey, Yazan Tahir, Anas Kiranyaz, Serkan Abul Kashem, Saad Bin Islam, Mohammad Tariqul Al Maadeed, Somaya Zughaier, Susu M. Khan, Muhammad Salman Chowdhury, Muhammad E.H. |
author_sort | Rahman, Tawsifur |
collection | PubMed |
description | Computer-aided diagnosis for the reliable and fast detection of coronavirus disease (COVID-19) has become a necessity to prevent the spread of the virus during the pandemic to ease the burden on the healthcare system. Chest X-ray (CXR) imaging has several advantages over other imaging and detection techniques. Numerous works have been reported on COVID-19 detection from a smaller set of original X-ray images. However, the effect of image enhancement and lung segmentation of a large dataset in COVID-19 detection was not reported in the literature. We have compiled a large X-ray dataset (COVQU) consisting of 18,479 CXR images with 8851 normal, 6012 non-COVID lung infections, and 3616 COVID-19 CXR images and their corresponding ground truth lung masks. To the best of our knowledge, this is the largest public COVID positive database and the lung masks. Five different image enhancement techniques: histogram equalization (HE), contrast limited adaptive histogram equalization (CLAHE), image complement, gamma correction, and balance contrast enhancement technique (BCET) were used to investigate the effect of image enhancement techniques on COVID-19 detection. A novel U-Net model was proposed and compared with the standard U-Net model for lung segmentation. Six different pre-trained Convolutional Neural Networks (CNNs) (ResNet18, ResNet50, ResNet101, InceptionV3, DenseNet201, and ChexNet) and a shallow CNN model were investigated on the plain and segmented lung CXR images. The novel U-Net model showed an accuracy, Intersection over Union (IoU), and Dice coefficient of 98.63%, 94.3%, and 96.94%, respectively for lung segmentation. The gamma correction-based enhancement technique outperforms other techniques in detecting COVID-19 from the plain and the segmented lung CXR images. Classification performance from plain CXR images is slightly better than the segmented lung CXR images; however, the reliability of network performance is significantly improved for the segmented lung images, which was observed using the visualization technique. The accuracy, precision, sensitivity, F1-score, and specificity were 95.11%, 94.55%, 94.56%, 94.53%, and 95.59% respectively for the segmented lung images. The proposed approach with very reliable and comparable performance will boost the fast and robust COVID-19 detection using chest X-ray images. |
format | Online Article Text |
id | pubmed-7946571 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-79465712021-03-11 Exploring the effect of image enhancement techniques on COVID-19 detection using chest X-ray images Rahman, Tawsifur Khandakar, Amith Qiblawey, Yazan Tahir, Anas Kiranyaz, Serkan Abul Kashem, Saad Bin Islam, Mohammad Tariqul Al Maadeed, Somaya Zughaier, Susu M. Khan, Muhammad Salman Chowdhury, Muhammad E.H. Comput Biol Med Article Computer-aided diagnosis for the reliable and fast detection of coronavirus disease (COVID-19) has become a necessity to prevent the spread of the virus during the pandemic to ease the burden on the healthcare system. Chest X-ray (CXR) imaging has several advantages over other imaging and detection techniques. Numerous works have been reported on COVID-19 detection from a smaller set of original X-ray images. However, the effect of image enhancement and lung segmentation of a large dataset in COVID-19 detection was not reported in the literature. We have compiled a large X-ray dataset (COVQU) consisting of 18,479 CXR images with 8851 normal, 6012 non-COVID lung infections, and 3616 COVID-19 CXR images and their corresponding ground truth lung masks. To the best of our knowledge, this is the largest public COVID positive database and the lung masks. Five different image enhancement techniques: histogram equalization (HE), contrast limited adaptive histogram equalization (CLAHE), image complement, gamma correction, and balance contrast enhancement technique (BCET) were used to investigate the effect of image enhancement techniques on COVID-19 detection. A novel U-Net model was proposed and compared with the standard U-Net model for lung segmentation. Six different pre-trained Convolutional Neural Networks (CNNs) (ResNet18, ResNet50, ResNet101, InceptionV3, DenseNet201, and ChexNet) and a shallow CNN model were investigated on the plain and segmented lung CXR images. The novel U-Net model showed an accuracy, Intersection over Union (IoU), and Dice coefficient of 98.63%, 94.3%, and 96.94%, respectively for lung segmentation. The gamma correction-based enhancement technique outperforms other techniques in detecting COVID-19 from the plain and the segmented lung CXR images. Classification performance from plain CXR images is slightly better than the segmented lung CXR images; however, the reliability of network performance is significantly improved for the segmented lung images, which was observed using the visualization technique. The accuracy, precision, sensitivity, F1-score, and specificity were 95.11%, 94.55%, 94.56%, 94.53%, and 95.59% respectively for the segmented lung images. The proposed approach with very reliable and comparable performance will boost the fast and robust COVID-19 detection using chest X-ray images. Elsevier Ltd. 2021-05 2021-03-11 /pmc/articles/PMC7946571/ /pubmed/33799220 http://dx.doi.org/10.1016/j.compbiomed.2021.104319 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Rahman, Tawsifur Khandakar, Amith Qiblawey, Yazan Tahir, Anas Kiranyaz, Serkan Abul Kashem, Saad Bin Islam, Mohammad Tariqul Al Maadeed, Somaya Zughaier, Susu M. Khan, Muhammad Salman Chowdhury, Muhammad E.H. Exploring the effect of image enhancement techniques on COVID-19 detection using chest X-ray images |
title | Exploring the effect of image enhancement techniques on COVID-19 detection using chest X-ray images |
title_full | Exploring the effect of image enhancement techniques on COVID-19 detection using chest X-ray images |
title_fullStr | Exploring the effect of image enhancement techniques on COVID-19 detection using chest X-ray images |
title_full_unstemmed | Exploring the effect of image enhancement techniques on COVID-19 detection using chest X-ray images |
title_short | Exploring the effect of image enhancement techniques on COVID-19 detection using chest X-ray images |
title_sort | exploring the effect of image enhancement techniques on covid-19 detection using chest x-ray images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7946571/ https://www.ncbi.nlm.nih.gov/pubmed/33799220 http://dx.doi.org/10.1016/j.compbiomed.2021.104319 |
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