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A machine learning-based prediction of the micropapillary/solid growth pattern in invasive lung adenocarcinoma with radiomics
BACKGROUND: Micropapillary/solid (MP/S) growth patterns of lung adenocarcinoma are vital for making clinical decisions regarding surgical intervention. This study aimed to predict the presence of a MP/S component in lung adenocarcinoma using radiomics analysis. METHODS: Between January 2011 and Dece...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7947386/ https://www.ncbi.nlm.nih.gov/pubmed/33718035 http://dx.doi.org/10.21037/tlcr-21-44 |
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author | He, Bingxi Song, Yongxiang Wang, Lili Wang, Tingting She, Yunlang Hou, Likun Zhang, Lei Wu, Chunyan Babu, Benson A. Bagci, Ulas Waseem, Tayab Yang, Minglei Xie, Dong Chen, Chang |
author_facet | He, Bingxi Song, Yongxiang Wang, Lili Wang, Tingting She, Yunlang Hou, Likun Zhang, Lei Wu, Chunyan Babu, Benson A. Bagci, Ulas Waseem, Tayab Yang, Minglei Xie, Dong Chen, Chang |
author_sort | He, Bingxi |
collection | PubMed |
description | BACKGROUND: Micropapillary/solid (MP/S) growth patterns of lung adenocarcinoma are vital for making clinical decisions regarding surgical intervention. This study aimed to predict the presence of a MP/S component in lung adenocarcinoma using radiomics analysis. METHODS: Between January 2011 and December 2013, patients undergoing curative invasive lung adenocarcinoma resection were included. Using the “PyRadiomics” package, we extracted 90 radiomics features from the preoperative computed tomography (CT) images. Subsequently, four prediction models were built by utilizing conventional machine learning approaches fitting into radiomics analysis: a generalized linear model (GLM), Naïve Bayes, support vector machine (SVM), and random forest classifiers. The models’ accuracy was assessed using a receiver operating curve (ROC) analysis, and the models’ stability was validated both internally and externally. RESULTS: A total of 268 patients were included as a primary cohort, and 36.6% (98/268) of them had lung adenocarcinoma with an MP/S component. Patients with an MP/S component had a higher rate of lymph node metastasis (18.4% versus 5.3%) and worse recurrence-free and overall survival. Five radiomics features were selected for model building, and in the internal validation, the four models achieved comparable performance of MP/S prediction in terms of area under the curve (AUC): GLM, 0.74 [95% confidence interval (CI): 0.65–0.83]; Naïve Bayes, 0.75 (95% CI: 0.65–0.85); SVM, 0.73 (95% CI: 0.61–0.83); and random forest, 0.72 (95% CI: 0.63–0.81). External validation was performed using a test cohort with 193 patients, and the AUC values were 0.70, 0.72, 0.73, and 0.69 for Naïve Bayes, SVM, random forest, and GLM, respectively. CONCLUSIONS: Radiomics-based machine learning approach is a very strong tool for preoperatively predicting the presence of MP/S growth patterns in lung adenocarcinoma, and can help customize treatment and surveillance strategies. |
format | Online Article Text |
id | pubmed-7947386 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-79473862021-03-12 A machine learning-based prediction of the micropapillary/solid growth pattern in invasive lung adenocarcinoma with radiomics He, Bingxi Song, Yongxiang Wang, Lili Wang, Tingting She, Yunlang Hou, Likun Zhang, Lei Wu, Chunyan Babu, Benson A. Bagci, Ulas Waseem, Tayab Yang, Minglei Xie, Dong Chen, Chang Transl Lung Cancer Res Original Article BACKGROUND: Micropapillary/solid (MP/S) growth patterns of lung adenocarcinoma are vital for making clinical decisions regarding surgical intervention. This study aimed to predict the presence of a MP/S component in lung adenocarcinoma using radiomics analysis. METHODS: Between January 2011 and December 2013, patients undergoing curative invasive lung adenocarcinoma resection were included. Using the “PyRadiomics” package, we extracted 90 radiomics features from the preoperative computed tomography (CT) images. Subsequently, four prediction models were built by utilizing conventional machine learning approaches fitting into radiomics analysis: a generalized linear model (GLM), Naïve Bayes, support vector machine (SVM), and random forest classifiers. The models’ accuracy was assessed using a receiver operating curve (ROC) analysis, and the models’ stability was validated both internally and externally. RESULTS: A total of 268 patients were included as a primary cohort, and 36.6% (98/268) of them had lung adenocarcinoma with an MP/S component. Patients with an MP/S component had a higher rate of lymph node metastasis (18.4% versus 5.3%) and worse recurrence-free and overall survival. Five radiomics features were selected for model building, and in the internal validation, the four models achieved comparable performance of MP/S prediction in terms of area under the curve (AUC): GLM, 0.74 [95% confidence interval (CI): 0.65–0.83]; Naïve Bayes, 0.75 (95% CI: 0.65–0.85); SVM, 0.73 (95% CI: 0.61–0.83); and random forest, 0.72 (95% CI: 0.63–0.81). External validation was performed using a test cohort with 193 patients, and the AUC values were 0.70, 0.72, 0.73, and 0.69 for Naïve Bayes, SVM, random forest, and GLM, respectively. CONCLUSIONS: Radiomics-based machine learning approach is a very strong tool for preoperatively predicting the presence of MP/S growth patterns in lung adenocarcinoma, and can help customize treatment and surveillance strategies. AME Publishing Company 2021-02 /pmc/articles/PMC7947386/ /pubmed/33718035 http://dx.doi.org/10.21037/tlcr-21-44 Text en 2021 Translational Lung Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article He, Bingxi Song, Yongxiang Wang, Lili Wang, Tingting She, Yunlang Hou, Likun Zhang, Lei Wu, Chunyan Babu, Benson A. Bagci, Ulas Waseem, Tayab Yang, Minglei Xie, Dong Chen, Chang A machine learning-based prediction of the micropapillary/solid growth pattern in invasive lung adenocarcinoma with radiomics |
title | A machine learning-based prediction of the micropapillary/solid growth pattern in invasive lung adenocarcinoma with radiomics |
title_full | A machine learning-based prediction of the micropapillary/solid growth pattern in invasive lung adenocarcinoma with radiomics |
title_fullStr | A machine learning-based prediction of the micropapillary/solid growth pattern in invasive lung adenocarcinoma with radiomics |
title_full_unstemmed | A machine learning-based prediction of the micropapillary/solid growth pattern in invasive lung adenocarcinoma with radiomics |
title_short | A machine learning-based prediction of the micropapillary/solid growth pattern in invasive lung adenocarcinoma with radiomics |
title_sort | machine learning-based prediction of the micropapillary/solid growth pattern in invasive lung adenocarcinoma with radiomics |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7947386/ https://www.ncbi.nlm.nih.gov/pubmed/33718035 http://dx.doi.org/10.21037/tlcr-21-44 |
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