Cargando…
PTM-Shepherd: Analysis and Summarization of Post-Translational and Chemical Modifications From Open Search Results
Open searching has proven to be an effective strategy for identifying both known and unknown modifications in shotgun proteomics experiments. Rather than being limited to a small set of user-specified modifications, open searches identify peptides with any mass shift that may correspond to a single...
Autores principales: | Geiszler, Daniel J., Kong, Andy T., Avtonomov, Dmitry M., Yu, Fengchao, Leprevost, Felipe da Veiga, Nesvizhskii, Alexey I. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Biochemistry and Molecular Biology
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7950090/ https://www.ncbi.nlm.nih.gov/pubmed/33568339 http://dx.doi.org/10.1074/mcp.TIR120.002216 |
Ejemplares similares
-
Fast Quantitative Analysis of timsTOF PASEF Data with MSFragger and IonQuant
por: Yu, Fengchao, et al.
Publicado: (2020) -
IonQuant Enables Accurate and Sensitive Label-Free Quantification With FDR-Controlled Match-Between-Runs
por: Yu, Fengchao, et al.
Publicado: (2021) -
Proteome-wide Structural Analysis of PTM Hotspots Reveals Regulatory Elements Predicted to Impact Biological Function and Disease
por: Torres, Matthew P., et al.
Publicado: (2016) -
Structural Analysis of PTM Hotspots (SAPH-ire) – A Quantitative Informatics Method Enabling the Discovery of Novel Regulatory Elements in Protein Families
por: Dewhurst, Henry M., et al.
Publicado: (2015) -
MSFragger-Labile: A Flexible Method to Improve Labile PTM Analysis in Proteomics
por: Polasky, Daniel A., et al.
Publicado: (2023)