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Expression and prognostic values of ARID family members in breast cancer
The ARID family is a superfamily of 15 members containing a domain that interacts with AT-rich DNA elements. However, the expression and prognostic roles of each ARID in breast cancer are still elusive. We used the TCGA and Kaplan-Meier plotter databases to assess the expression and prognostic value...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7950271/ https://www.ncbi.nlm.nih.gov/pubmed/33592583 http://dx.doi.org/10.18632/aging.202489 |
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author | Zhang, Jinfeng Hou, Siyu You, Zilong Li, Guozheng Xu, Shouping Li, Xianyong Zhang, Xianyu Lei, Bo Pang, Da |
author_facet | Zhang, Jinfeng Hou, Siyu You, Zilong Li, Guozheng Xu, Shouping Li, Xianyong Zhang, Xianyu Lei, Bo Pang, Da |
author_sort | Zhang, Jinfeng |
collection | PubMed |
description | The ARID family is a superfamily of 15 members containing a domain that interacts with AT-rich DNA elements. However, the expression and prognostic roles of each ARID in breast cancer are still elusive. We used the TCGA and Kaplan-Meier plotter databases to assess the expression and prognostic values of ARID mRNA levels in breast cancer respectively. In the present study, 6 members were significantly lower in tumor tissues than those in the normal tissues, while 6 members were significantly higher. Further assessment of ARID expression in breast cancer with different molecular subtypes, 3 members were significantly higher in no-luminal molecular subtype than those in the luminal molecular subtype, and 6 members were significantly higher. In regard to prognostic values, high expression of ARID1A, ARID2, ARID3B, ARID4A, ARID5A, ARID5B, JARID1A were associated with favorable outcome, while ARID4B and JARID1B were correlated to a worse outcome. We further analyzed the prognostic value of ARID in different intrinsic subtypes and clinicopathological features of breast cancer. We found many meaningful ARID family biomarkers in breast cancer. The relevant results will expound the role of ARID in breast cancer and may further provide new insight to explore the ARID-targeting reagents for treating breast cancer patients. |
format | Online Article Text |
id | pubmed-7950271 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-79502712021-03-23 Expression and prognostic values of ARID family members in breast cancer Zhang, Jinfeng Hou, Siyu You, Zilong Li, Guozheng Xu, Shouping Li, Xianyong Zhang, Xianyu Lei, Bo Pang, Da Aging (Albany NY) Research Paper The ARID family is a superfamily of 15 members containing a domain that interacts with AT-rich DNA elements. However, the expression and prognostic roles of each ARID in breast cancer are still elusive. We used the TCGA and Kaplan-Meier plotter databases to assess the expression and prognostic values of ARID mRNA levels in breast cancer respectively. In the present study, 6 members were significantly lower in tumor tissues than those in the normal tissues, while 6 members were significantly higher. Further assessment of ARID expression in breast cancer with different molecular subtypes, 3 members were significantly higher in no-luminal molecular subtype than those in the luminal molecular subtype, and 6 members were significantly higher. In regard to prognostic values, high expression of ARID1A, ARID2, ARID3B, ARID4A, ARID5A, ARID5B, JARID1A were associated with favorable outcome, while ARID4B and JARID1B were correlated to a worse outcome. We further analyzed the prognostic value of ARID in different intrinsic subtypes and clinicopathological features of breast cancer. We found many meaningful ARID family biomarkers in breast cancer. The relevant results will expound the role of ARID in breast cancer and may further provide new insight to explore the ARID-targeting reagents for treating breast cancer patients. Impact Journals 2021-02-11 /pmc/articles/PMC7950271/ /pubmed/33592583 http://dx.doi.org/10.18632/aging.202489 Text en Copyright: © 2021 Zhang et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Zhang, Jinfeng Hou, Siyu You, Zilong Li, Guozheng Xu, Shouping Li, Xianyong Zhang, Xianyu Lei, Bo Pang, Da Expression and prognostic values of ARID family members in breast cancer |
title | Expression and prognostic values of ARID family members in breast cancer |
title_full | Expression and prognostic values of ARID family members in breast cancer |
title_fullStr | Expression and prognostic values of ARID family members in breast cancer |
title_full_unstemmed | Expression and prognostic values of ARID family members in breast cancer |
title_short | Expression and prognostic values of ARID family members in breast cancer |
title_sort | expression and prognostic values of arid family members in breast cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7950271/ https://www.ncbi.nlm.nih.gov/pubmed/33592583 http://dx.doi.org/10.18632/aging.202489 |
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