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Expression and prognostic values of ARID family members in breast cancer

The ARID family is a superfamily of 15 members containing a domain that interacts with AT-rich DNA elements. However, the expression and prognostic roles of each ARID in breast cancer are still elusive. We used the TCGA and Kaplan-Meier plotter databases to assess the expression and prognostic value...

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Autores principales: Zhang, Jinfeng, Hou, Siyu, You, Zilong, Li, Guozheng, Xu, Shouping, Li, Xianyong, Zhang, Xianyu, Lei, Bo, Pang, Da
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7950271/
https://www.ncbi.nlm.nih.gov/pubmed/33592583
http://dx.doi.org/10.18632/aging.202489
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author Zhang, Jinfeng
Hou, Siyu
You, Zilong
Li, Guozheng
Xu, Shouping
Li, Xianyong
Zhang, Xianyu
Lei, Bo
Pang, Da
author_facet Zhang, Jinfeng
Hou, Siyu
You, Zilong
Li, Guozheng
Xu, Shouping
Li, Xianyong
Zhang, Xianyu
Lei, Bo
Pang, Da
author_sort Zhang, Jinfeng
collection PubMed
description The ARID family is a superfamily of 15 members containing a domain that interacts with AT-rich DNA elements. However, the expression and prognostic roles of each ARID in breast cancer are still elusive. We used the TCGA and Kaplan-Meier plotter databases to assess the expression and prognostic values of ARID mRNA levels in breast cancer respectively. In the present study, 6 members were significantly lower in tumor tissues than those in the normal tissues, while 6 members were significantly higher. Further assessment of ARID expression in breast cancer with different molecular subtypes, 3 members were significantly higher in no-luminal molecular subtype than those in the luminal molecular subtype, and 6 members were significantly higher. In regard to prognostic values, high expression of ARID1A, ARID2, ARID3B, ARID4A, ARID5A, ARID5B, JARID1A were associated with favorable outcome, while ARID4B and JARID1B were correlated to a worse outcome. We further analyzed the prognostic value of ARID in different intrinsic subtypes and clinicopathological features of breast cancer. We found many meaningful ARID family biomarkers in breast cancer. The relevant results will expound the role of ARID in breast cancer and may further provide new insight to explore the ARID-targeting reagents for treating breast cancer patients.
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spelling pubmed-79502712021-03-23 Expression and prognostic values of ARID family members in breast cancer Zhang, Jinfeng Hou, Siyu You, Zilong Li, Guozheng Xu, Shouping Li, Xianyong Zhang, Xianyu Lei, Bo Pang, Da Aging (Albany NY) Research Paper The ARID family is a superfamily of 15 members containing a domain that interacts with AT-rich DNA elements. However, the expression and prognostic roles of each ARID in breast cancer are still elusive. We used the TCGA and Kaplan-Meier plotter databases to assess the expression and prognostic values of ARID mRNA levels in breast cancer respectively. In the present study, 6 members were significantly lower in tumor tissues than those in the normal tissues, while 6 members were significantly higher. Further assessment of ARID expression in breast cancer with different molecular subtypes, 3 members were significantly higher in no-luminal molecular subtype than those in the luminal molecular subtype, and 6 members were significantly higher. In regard to prognostic values, high expression of ARID1A, ARID2, ARID3B, ARID4A, ARID5A, ARID5B, JARID1A were associated with favorable outcome, while ARID4B and JARID1B were correlated to a worse outcome. We further analyzed the prognostic value of ARID in different intrinsic subtypes and clinicopathological features of breast cancer. We found many meaningful ARID family biomarkers in breast cancer. The relevant results will expound the role of ARID in breast cancer and may further provide new insight to explore the ARID-targeting reagents for treating breast cancer patients. Impact Journals 2021-02-11 /pmc/articles/PMC7950271/ /pubmed/33592583 http://dx.doi.org/10.18632/aging.202489 Text en Copyright: © 2021 Zhang et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Zhang, Jinfeng
Hou, Siyu
You, Zilong
Li, Guozheng
Xu, Shouping
Li, Xianyong
Zhang, Xianyu
Lei, Bo
Pang, Da
Expression and prognostic values of ARID family members in breast cancer
title Expression and prognostic values of ARID family members in breast cancer
title_full Expression and prognostic values of ARID family members in breast cancer
title_fullStr Expression and prognostic values of ARID family members in breast cancer
title_full_unstemmed Expression and prognostic values of ARID family members in breast cancer
title_short Expression and prognostic values of ARID family members in breast cancer
title_sort expression and prognostic values of arid family members in breast cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7950271/
https://www.ncbi.nlm.nih.gov/pubmed/33592583
http://dx.doi.org/10.18632/aging.202489
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