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A research parasite's perspective on establishing a baseline to avoid errors in secondary analyses

To enhance reproducibility in scientific research, more and more datasets are becoming publicly available so that researchers can perform secondary analyses to investigate questions the original scientists had not posited. This increases the return on investment for the NIH and other funding bodies....

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Autor principal: Raman, Ayush T
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7953484/
https://www.ncbi.nlm.nih.gov/pubmed/33710326
http://dx.doi.org/10.1093/gigascience/giab015
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author Raman, Ayush T
author_facet Raman, Ayush T
author_sort Raman, Ayush T
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description To enhance reproducibility in scientific research, more and more datasets are becoming publicly available so that researchers can perform secondary analyses to investigate questions the original scientists had not posited. This increases the return on investment for the NIH and other funding bodies. These datasets, however, are not perfect, and a better understanding of the assumptions that shaped them is required. The 2020 Junior Research Parasite Award recognized our work that showed that the signal-to-noise ratio in a particular dataset had not been investigated, leading to an erroneous conclusion in the original research. In this commentary, I share the process that led to the identification of the problem and hopefully provide useful lessons for other research parasites.
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spelling pubmed-79534842021-03-17 A research parasite's perspective on establishing a baseline to avoid errors in secondary analyses Raman, Ayush T Gigascience Commentary To enhance reproducibility in scientific research, more and more datasets are becoming publicly available so that researchers can perform secondary analyses to investigate questions the original scientists had not posited. This increases the return on investment for the NIH and other funding bodies. These datasets, however, are not perfect, and a better understanding of the assumptions that shaped them is required. The 2020 Junior Research Parasite Award recognized our work that showed that the signal-to-noise ratio in a particular dataset had not been investigated, leading to an erroneous conclusion in the original research. In this commentary, I share the process that led to the identification of the problem and hopefully provide useful lessons for other research parasites. Oxford University Press 2021-03-12 /pmc/articles/PMC7953484/ /pubmed/33710326 http://dx.doi.org/10.1093/gigascience/giab015 Text en © The Author(s) 2021. Published by Oxford University Press GigaScience. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Commentary
Raman, Ayush T
A research parasite's perspective on establishing a baseline to avoid errors in secondary analyses
title A research parasite's perspective on establishing a baseline to avoid errors in secondary analyses
title_full A research parasite's perspective on establishing a baseline to avoid errors in secondary analyses
title_fullStr A research parasite's perspective on establishing a baseline to avoid errors in secondary analyses
title_full_unstemmed A research parasite's perspective on establishing a baseline to avoid errors in secondary analyses
title_short A research parasite's perspective on establishing a baseline to avoid errors in secondary analyses
title_sort research parasite's perspective on establishing a baseline to avoid errors in secondary analyses
topic Commentary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7953484/
https://www.ncbi.nlm.nih.gov/pubmed/33710326
http://dx.doi.org/10.1093/gigascience/giab015
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