The complete chloroplast genome of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour

In this study, we reported and characterized the complete chloroplast genome sequence of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour. The chloroplast genome was determined to be 158,250 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 84,929 bp and 12,6...

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Autores principales: Sun, Jiwei, Li, Yaqi, Ci, Xiaotong, Li, Xiyan, Wang, Dawei, Cai, Nianhui, Xu, Yulan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954416/
https://www.ncbi.nlm.nih.gov/pubmed/33763566
http://dx.doi.org/10.1080/23802359.2020.1869606
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author Sun, Jiwei
Li, Yaqi
Ci, Xiaotong
Li, Xiyan
Wang, Dawei
Cai, Nianhui
Xu, Yulan
author_facet Sun, Jiwei
Li, Yaqi
Ci, Xiaotong
Li, Xiyan
Wang, Dawei
Cai, Nianhui
Xu, Yulan
author_sort Sun, Jiwei
collection PubMed
description In this study, we reported and characterized the complete chloroplast genome sequence of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour. The chloroplast genome was determined to be 158,250 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 84,929 bp and 12,663 bp, respectively, which were separated by a pair of 30,329 bp inverted repeat (IR) regions. The genome is predicted to contain 121 genes, including 78 protein-coding genes, 35 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 38.1%. A phylogenetic tree reconstructed by 12 chloroplast genomes reveals that C. fargesii is mostly related to Catalpa. ovata and Catalpa. speciosa. This study identified the unique characteristics of the C. fargesii cp genome, which will provide a theoretical basis for species identification and biological research.
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spelling pubmed-79544162021-03-23 The complete chloroplast genome of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour Sun, Jiwei Li, Yaqi Ci, Xiaotong Li, Xiyan Wang, Dawei Cai, Nianhui Xu, Yulan Mitochondrial DNA B Resour Mitogenome Announcement In this study, we reported and characterized the complete chloroplast genome sequence of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour. The chloroplast genome was determined to be 158,250 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 84,929 bp and 12,663 bp, respectively, which were separated by a pair of 30,329 bp inverted repeat (IR) regions. The genome is predicted to contain 121 genes, including 78 protein-coding genes, 35 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 38.1%. A phylogenetic tree reconstructed by 12 chloroplast genomes reveals that C. fargesii is mostly related to Catalpa. ovata and Catalpa. speciosa. This study identified the unique characteristics of the C. fargesii cp genome, which will provide a theoretical basis for species identification and biological research. Taylor & Francis 2021-03-11 /pmc/articles/PMC7954416/ /pubmed/33763566 http://dx.doi.org/10.1080/23802359.2020.1869606 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Sun, Jiwei
Li, Yaqi
Ci, Xiaotong
Li, Xiyan
Wang, Dawei
Cai, Nianhui
Xu, Yulan
The complete chloroplast genome of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour
title The complete chloroplast genome of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour
title_full The complete chloroplast genome of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour
title_fullStr The complete chloroplast genome of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour
title_full_unstemmed The complete chloroplast genome of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour
title_short The complete chloroplast genome of Catalpa fargesii Bur. f. duclouxii (Dode) Gilmour
title_sort complete chloroplast genome of catalpa fargesii bur. f. duclouxii (dode) gilmour
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954416/
https://www.ncbi.nlm.nih.gov/pubmed/33763566
http://dx.doi.org/10.1080/23802359.2020.1869606
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