The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae)

The complete chloroplast genome of Akebia longeracemosa, a monoecious woody vine endemic to China, was determined. The total genome size is 158,020 bp, containing a large single copy region of 86,659 bp, a small single copy region of 19,059 bp, and a pair of inverted repeats of 26,151 bp. The chloro...

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Autores principales: Xiao, Xiong, Deng, Huisheng, Xu, Lingling, Wen, Feng, Han, Xingjie, Liao, Liang, Li, Tongjian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954470/
https://www.ncbi.nlm.nih.gov/pubmed/33763592
http://dx.doi.org/10.1080/23802359.2021.1884018
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author Xiao, Xiong
Deng, Huisheng
Xu, Lingling
Wen, Feng
Han, Xingjie
Liao, Liang
Li, Tongjian
author_facet Xiao, Xiong
Deng, Huisheng
Xu, Lingling
Wen, Feng
Han, Xingjie
Liao, Liang
Li, Tongjian
author_sort Xiao, Xiong
collection PubMed
description The complete chloroplast genome of Akebia longeracemosa, a monoecious woody vine endemic to China, was determined. The total genome size is 158,020 bp, containing a large single copy region of 86,659 bp, a small single copy region of 19,059 bp, and a pair of inverted repeats of 26,151 bp. The chloroplast genome encodes 113 unique genes, including 79 protein-coding genes, 30 tRNA genes and 4 rRNA genes. Among them, fifteen genes have one intron each, and three genes contain two introns. The overall GC content is 38.7%, while the corresponding values of LSC, SSC, and IR regions are 37.1, 33.6, and 43.1%, respectively. Phylogenetic analysis showed that A. longeracemosa was closely related to A. trifoliata.
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spelling pubmed-79544702021-03-23 The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae) Xiao, Xiong Deng, Huisheng Xu, Lingling Wen, Feng Han, Xingjie Liao, Liang Li, Tongjian Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Akebia longeracemosa, a monoecious woody vine endemic to China, was determined. The total genome size is 158,020 bp, containing a large single copy region of 86,659 bp, a small single copy region of 19,059 bp, and a pair of inverted repeats of 26,151 bp. The chloroplast genome encodes 113 unique genes, including 79 protein-coding genes, 30 tRNA genes and 4 rRNA genes. Among them, fifteen genes have one intron each, and three genes contain two introns. The overall GC content is 38.7%, while the corresponding values of LSC, SSC, and IR regions are 37.1, 33.6, and 43.1%, respectively. Phylogenetic analysis showed that A. longeracemosa was closely related to A. trifoliata. Taylor & Francis 2021-03-11 /pmc/articles/PMC7954470/ /pubmed/33763592 http://dx.doi.org/10.1080/23802359.2021.1884018 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xiao, Xiong
Deng, Huisheng
Xu, Lingling
Wen, Feng
Han, Xingjie
Liao, Liang
Li, Tongjian
The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae)
title The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae)
title_full The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae)
title_fullStr The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae)
title_full_unstemmed The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae)
title_short The complete chloroplast genome of Akebia longeracemosa (Lardizabalaceae)
title_sort complete chloroplast genome of akebia longeracemosa (lardizabalaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954470/
https://www.ncbi.nlm.nih.gov/pubmed/33763592
http://dx.doi.org/10.1080/23802359.2021.1884018
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