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Characterization of the complete chloroplast genome of Puccinellia distans
Puccinellia distans is a perennial gramineous plant with the characteristics of drought and salt tolerance. It is a special pioneer plant for saline-alkali land improvement and is increasingly used for ecological restoration of saline-alkali grassland. However, the evolutionary relationship of P. di...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954480/ https://www.ncbi.nlm.nih.gov/pubmed/33763577 http://dx.doi.org/10.1080/23802359.2021.1882899 |
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author | Zhang, Yan Liu, Minjie Qin, Yan Liu, Wenhui Wei, Xiaoxing |
author_facet | Zhang, Yan Liu, Minjie Qin, Yan Liu, Wenhui Wei, Xiaoxing |
author_sort | Zhang, Yan |
collection | PubMed |
description | Puccinellia distans is a perennial gramineous plant with the characteristics of drought and salt tolerance. It is a special pioneer plant for saline-alkali land improvement and is increasingly used for ecological restoration of saline-alkali grassland. However, the evolutionary relationship of P. distans is limited in study. In this study, the complete chloroplast genome sequence of P. distans was evaluated. The complete chloroplast genome of P. distans was 135,647 bp in length, containing a pair of inverted repeated (IR) regions (21,444 bp) that are separated by a large single-copy (LSC) region of 800,15 bp, and a small single-copy (SSC) region of 12,744 bp. A total of 129 functional genes were annotated, including 83 protein-coding genes (mRNA), 38 tRNA genes, and 8 rRNA genes. The phylogenetic relationships of 12 species indicated that P. distans was closely related to P. muttalliana. This complete chloroplast genome will provide a theoretical basis for species identification and biological research. |
format | Online Article Text |
id | pubmed-7954480 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-79544802021-03-23 Characterization of the complete chloroplast genome of Puccinellia distans Zhang, Yan Liu, Minjie Qin, Yan Liu, Wenhui Wei, Xiaoxing Mitochondrial DNA B Resour Mitogenome Announcement Puccinellia distans is a perennial gramineous plant with the characteristics of drought and salt tolerance. It is a special pioneer plant for saline-alkali land improvement and is increasingly used for ecological restoration of saline-alkali grassland. However, the evolutionary relationship of P. distans is limited in study. In this study, the complete chloroplast genome sequence of P. distans was evaluated. The complete chloroplast genome of P. distans was 135,647 bp in length, containing a pair of inverted repeated (IR) regions (21,444 bp) that are separated by a large single-copy (LSC) region of 800,15 bp, and a small single-copy (SSC) region of 12,744 bp. A total of 129 functional genes were annotated, including 83 protein-coding genes (mRNA), 38 tRNA genes, and 8 rRNA genes. The phylogenetic relationships of 12 species indicated that P. distans was closely related to P. muttalliana. This complete chloroplast genome will provide a theoretical basis for species identification and biological research. Taylor & Francis 2021-03-11 /pmc/articles/PMC7954480/ /pubmed/33763577 http://dx.doi.org/10.1080/23802359.2021.1882899 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Yan Liu, Minjie Qin, Yan Liu, Wenhui Wei, Xiaoxing Characterization of the complete chloroplast genome of Puccinellia distans |
title | Characterization of the complete chloroplast genome of Puccinellia distans |
title_full | Characterization of the complete chloroplast genome of Puccinellia distans |
title_fullStr | Characterization of the complete chloroplast genome of Puccinellia distans |
title_full_unstemmed | Characterization of the complete chloroplast genome of Puccinellia distans |
title_short | Characterization of the complete chloroplast genome of Puccinellia distans |
title_sort | characterization of the complete chloroplast genome of puccinellia distans |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954480/ https://www.ncbi.nlm.nih.gov/pubmed/33763577 http://dx.doi.org/10.1080/23802359.2021.1882899 |
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