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Characterization of the complete chloroplast genome of Puccinellia distans

Puccinellia distans is a perennial gramineous plant with the characteristics of drought and salt tolerance. It is a special pioneer plant for saline-alkali land improvement and is increasingly used for ecological restoration of saline-alkali grassland. However, the evolutionary relationship of P. di...

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Autores principales: Zhang, Yan, Liu, Minjie, Qin, Yan, Liu, Wenhui, Wei, Xiaoxing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954480/
https://www.ncbi.nlm.nih.gov/pubmed/33763577
http://dx.doi.org/10.1080/23802359.2021.1882899
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author Zhang, Yan
Liu, Minjie
Qin, Yan
Liu, Wenhui
Wei, Xiaoxing
author_facet Zhang, Yan
Liu, Minjie
Qin, Yan
Liu, Wenhui
Wei, Xiaoxing
author_sort Zhang, Yan
collection PubMed
description Puccinellia distans is a perennial gramineous plant with the characteristics of drought and salt tolerance. It is a special pioneer plant for saline-alkali land improvement and is increasingly used for ecological restoration of saline-alkali grassland. However, the evolutionary relationship of P. distans is limited in study. In this study, the complete chloroplast genome sequence of P. distans was evaluated. The complete chloroplast genome of P. distans was 135,647 bp in length, containing a pair of inverted repeated (IR) regions (21,444 bp) that are separated by a large single-copy (LSC) region of 800,15 bp, and a small single-copy (SSC) region of 12,744 bp. A total of 129 functional genes were annotated, including 83 protein-coding genes (mRNA), 38 tRNA genes, and 8 rRNA genes. The phylogenetic relationships of 12 species indicated that P. distans was closely related to P. muttalliana. This complete chloroplast genome will provide a theoretical basis for species identification and biological research.
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spelling pubmed-79544802021-03-23 Characterization of the complete chloroplast genome of Puccinellia distans Zhang, Yan Liu, Minjie Qin, Yan Liu, Wenhui Wei, Xiaoxing Mitochondrial DNA B Resour Mitogenome Announcement Puccinellia distans is a perennial gramineous plant with the characteristics of drought and salt tolerance. It is a special pioneer plant for saline-alkali land improvement and is increasingly used for ecological restoration of saline-alkali grassland. However, the evolutionary relationship of P. distans is limited in study. In this study, the complete chloroplast genome sequence of P. distans was evaluated. The complete chloroplast genome of P. distans was 135,647 bp in length, containing a pair of inverted repeated (IR) regions (21,444 bp) that are separated by a large single-copy (LSC) region of 800,15 bp, and a small single-copy (SSC) region of 12,744 bp. A total of 129 functional genes were annotated, including 83 protein-coding genes (mRNA), 38 tRNA genes, and 8 rRNA genes. The phylogenetic relationships of 12 species indicated that P. distans was closely related to P. muttalliana. This complete chloroplast genome will provide a theoretical basis for species identification and biological research. Taylor & Francis 2021-03-11 /pmc/articles/PMC7954480/ /pubmed/33763577 http://dx.doi.org/10.1080/23802359.2021.1882899 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Yan
Liu, Minjie
Qin, Yan
Liu, Wenhui
Wei, Xiaoxing
Characterization of the complete chloroplast genome of Puccinellia distans
title Characterization of the complete chloroplast genome of Puccinellia distans
title_full Characterization of the complete chloroplast genome of Puccinellia distans
title_fullStr Characterization of the complete chloroplast genome of Puccinellia distans
title_full_unstemmed Characterization of the complete chloroplast genome of Puccinellia distans
title_short Characterization of the complete chloroplast genome of Puccinellia distans
title_sort characterization of the complete chloroplast genome of puccinellia distans
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954480/
https://www.ncbi.nlm.nih.gov/pubmed/33763577
http://dx.doi.org/10.1080/23802359.2021.1882899
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