The complete chloroplast genome of Desmodium uncinatum (Fabaceae)

Desmodium uncinatum is one of the most important legume forage which distributes in tropical and subtropical regions of the world. In our study, we obtained the complete chloroplast genome of D. uncinatum with a length of 148,853 bp, including a large single copy region of 84,019 bp, small single co...

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Detalles Bibliográficos
Autores principales: Yi, Dengxia, Jiang, Wenbo, Ma, Lin, Pang, Yongzhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954487/
https://www.ncbi.nlm.nih.gov/pubmed/33763558
http://dx.doi.org/10.1080/23802359.2020.1852896
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author Yi, Dengxia
Jiang, Wenbo
Ma, Lin
Pang, Yongzhen
author_facet Yi, Dengxia
Jiang, Wenbo
Ma, Lin
Pang, Yongzhen
author_sort Yi, Dengxia
collection PubMed
description Desmodium uncinatum is one of the most important legume forage which distributes in tropical and subtropical regions of the world. In our study, we obtained the complete chloroplast genome of D. uncinatum with a length of 148,853 bp, including a large single copy region of 84,019 bp, small single copy region of 18,223 bp, and a pair of inverted repeat regions of 20,672 bp. The GC content in the whole chloroplast genome of D. uncinatum is 35.16%. Among the 133 unique genes in the circular genome, 37 tRNA, 12 rRNA and 84 protein-coding genes were successfully annotated. We constructed the Maximum likelihood (ML) tree with 11 species, and came to the conclusion that D. uncinatum was phylogenetically closely related to the genus of Glycine and Trifolium.
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spelling pubmed-79544872021-03-23 The complete chloroplast genome of Desmodium uncinatum (Fabaceae) Yi, Dengxia Jiang, Wenbo Ma, Lin Pang, Yongzhen Mitochondrial DNA B Resour Mitogenome Announcement Desmodium uncinatum is one of the most important legume forage which distributes in tropical and subtropical regions of the world. In our study, we obtained the complete chloroplast genome of D. uncinatum with a length of 148,853 bp, including a large single copy region of 84,019 bp, small single copy region of 18,223 bp, and a pair of inverted repeat regions of 20,672 bp. The GC content in the whole chloroplast genome of D. uncinatum is 35.16%. Among the 133 unique genes in the circular genome, 37 tRNA, 12 rRNA and 84 protein-coding genes were successfully annotated. We constructed the Maximum likelihood (ML) tree with 11 species, and came to the conclusion that D. uncinatum was phylogenetically closely related to the genus of Glycine and Trifolium. Taylor & Francis 2021-03-11 /pmc/articles/PMC7954487/ /pubmed/33763558 http://dx.doi.org/10.1080/23802359.2020.1852896 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yi, Dengxia
Jiang, Wenbo
Ma, Lin
Pang, Yongzhen
The complete chloroplast genome of Desmodium uncinatum (Fabaceae)
title The complete chloroplast genome of Desmodium uncinatum (Fabaceae)
title_full The complete chloroplast genome of Desmodium uncinatum (Fabaceae)
title_fullStr The complete chloroplast genome of Desmodium uncinatum (Fabaceae)
title_full_unstemmed The complete chloroplast genome of Desmodium uncinatum (Fabaceae)
title_short The complete chloroplast genome of Desmodium uncinatum (Fabaceae)
title_sort complete chloroplast genome of desmodium uncinatum (fabaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954487/
https://www.ncbi.nlm.nih.gov/pubmed/33763558
http://dx.doi.org/10.1080/23802359.2020.1852896
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