Complete chloroplast genome of Ulva compressa (Ulvales: Ulvaceae)

Ulva compressa is one of the causal green macroalgae in many countries. In this study, complete chloroplast genome sequence of U. compressa was reported, and the total length of this species was 94,226 bp (GenBank accession number MT916929). The overall base composition of chloroplast genome was A (...

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Autores principales: Xia, Lihua, Qin, Yutao, Liu, Jinlin, Zhang, Haofei, Wu, Lingjuan, Gao, Song, Zhuang, Minmin, Xia, Jing, Zhao, Shuang, Xu, Yang, Fu, Meilin, Sun, Yuqing, Tong, Yichao, Zhang, Jianheng, He, Peimin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954497/
https://www.ncbi.nlm.nih.gov/pubmed/33763560
http://dx.doi.org/10.1080/23802359.2020.1860696
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author Xia, Lihua
Qin, Yutao
Liu, Jinlin
Zhang, Haofei
Wu, Lingjuan
Gao, Song
Zhuang, Minmin
Xia, Jing
Zhao, Shuang
Xu, Yang
Fu, Meilin
Sun, Yuqing
Tong, Yichao
Zhang, Jianheng
He, Peimin
author_facet Xia, Lihua
Qin, Yutao
Liu, Jinlin
Zhang, Haofei
Wu, Lingjuan
Gao, Song
Zhuang, Minmin
Xia, Jing
Zhao, Shuang
Xu, Yang
Fu, Meilin
Sun, Yuqing
Tong, Yichao
Zhang, Jianheng
He, Peimin
author_sort Xia, Lihua
collection PubMed
description Ulva compressa is one of the causal green macroalgae in many countries. In this study, complete chloroplast genome sequence of U. compressa was reported, and the total length of this species was 94,226 bp (GenBank accession number MT916929). The overall base composition of chloroplast genome was A (37.2%), T (37.0%), C (12.7%) and G (13.1%), and the percentage of A + T (74.2%) was higher than C + G (25.8%). U. compressa chloroplast genome encoded 90 genes, including 63 protein-coding genes, 23 transfer RNAs genes, and 4 ribosomal RNAs genes. The maximum likelihood phylogenetic analysis showed that U. compressa is the closest sister species of U. linza. This study will be helpful to understand the genetic diversity of Ulva species.
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spelling pubmed-79544972021-03-23 Complete chloroplast genome of Ulva compressa (Ulvales: Ulvaceae) Xia, Lihua Qin, Yutao Liu, Jinlin Zhang, Haofei Wu, Lingjuan Gao, Song Zhuang, Minmin Xia, Jing Zhao, Shuang Xu, Yang Fu, Meilin Sun, Yuqing Tong, Yichao Zhang, Jianheng He, Peimin Mitochondrial DNA B Resour Mitogenome Announcement Ulva compressa is one of the causal green macroalgae in many countries. In this study, complete chloroplast genome sequence of U. compressa was reported, and the total length of this species was 94,226 bp (GenBank accession number MT916929). The overall base composition of chloroplast genome was A (37.2%), T (37.0%), C (12.7%) and G (13.1%), and the percentage of A + T (74.2%) was higher than C + G (25.8%). U. compressa chloroplast genome encoded 90 genes, including 63 protein-coding genes, 23 transfer RNAs genes, and 4 ribosomal RNAs genes. The maximum likelihood phylogenetic analysis showed that U. compressa is the closest sister species of U. linza. This study will be helpful to understand the genetic diversity of Ulva species. Taylor & Francis 2021-03-11 /pmc/articles/PMC7954497/ /pubmed/33763560 http://dx.doi.org/10.1080/23802359.2020.1860696 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xia, Lihua
Qin, Yutao
Liu, Jinlin
Zhang, Haofei
Wu, Lingjuan
Gao, Song
Zhuang, Minmin
Xia, Jing
Zhao, Shuang
Xu, Yang
Fu, Meilin
Sun, Yuqing
Tong, Yichao
Zhang, Jianheng
He, Peimin
Complete chloroplast genome of Ulva compressa (Ulvales: Ulvaceae)
title Complete chloroplast genome of Ulva compressa (Ulvales: Ulvaceae)
title_full Complete chloroplast genome of Ulva compressa (Ulvales: Ulvaceae)
title_fullStr Complete chloroplast genome of Ulva compressa (Ulvales: Ulvaceae)
title_full_unstemmed Complete chloroplast genome of Ulva compressa (Ulvales: Ulvaceae)
title_short Complete chloroplast genome of Ulva compressa (Ulvales: Ulvaceae)
title_sort complete chloroplast genome of ulva compressa (ulvales: ulvaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954497/
https://www.ncbi.nlm.nih.gov/pubmed/33763560
http://dx.doi.org/10.1080/23802359.2020.1860696
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