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Multiview Self-Supervised Segmentation for OARs Delineation in Radiotherapy

Radiotherapy has become a common treatment option for head and neck (H&N) cancer, and organs at risk (OARs) need to be delineated to implement a high conformal dose distribution. Manual drawing of OARs is time consuming and inaccurate, so automatic drawing based on deep learning models has been...

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Autores principales: Liu, Cong, Zhang, Xiaofei, Si, Wen, Ni, Xinye
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954615/
https://www.ncbi.nlm.nih.gov/pubmed/33747116
http://dx.doi.org/10.1155/2021/8894222
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author Liu, Cong
Zhang, Xiaofei
Si, Wen
Ni, Xinye
author_facet Liu, Cong
Zhang, Xiaofei
Si, Wen
Ni, Xinye
author_sort Liu, Cong
collection PubMed
description Radiotherapy has become a common treatment option for head and neck (H&N) cancer, and organs at risk (OARs) need to be delineated to implement a high conformal dose distribution. Manual drawing of OARs is time consuming and inaccurate, so automatic drawing based on deep learning models has been proposed to accurately delineate the OARs. However, state-of-the-art performance usually requires a decent amount of delineation, but collecting pixel-level manual delineations is labor intensive and may not be necessary for representation learning. Encouraged by the recent progress in self-supervised learning, this study proposes and evaluates a novel multiview contrastive representation learning to boost the models from unlabelled data. The proposed learning architecture leverages three views of CTs (coronal, sagittal, and transverse plane) to collect positive and negative training samples. Specifically, a CT in 3D is first projected into three 2D views (coronal, sagittal, and transverse planes), then a convolutional neural network takes 3 views as inputs and outputs three individual representations in latent space, and finally, a contrastive loss is used to pull representation of different views of the same image closer (“positive pairs”) and push representations of views from different images (“negative pairs”) apart. To evaluate performance, we collected 220 CT images in H&N cancer patients. The experiment demonstrates that our method significantly improves quantitative performance over the state-of-the-art (from 83% to 86% in absolute Dice scores). Thus, our method provides a powerful and principled means to deal with the label-scarce problem.
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spelling pubmed-79546152021-03-19 Multiview Self-Supervised Segmentation for OARs Delineation in Radiotherapy Liu, Cong Zhang, Xiaofei Si, Wen Ni, Xinye Evid Based Complement Alternat Med Research Article Radiotherapy has become a common treatment option for head and neck (H&N) cancer, and organs at risk (OARs) need to be delineated to implement a high conformal dose distribution. Manual drawing of OARs is time consuming and inaccurate, so automatic drawing based on deep learning models has been proposed to accurately delineate the OARs. However, state-of-the-art performance usually requires a decent amount of delineation, but collecting pixel-level manual delineations is labor intensive and may not be necessary for representation learning. Encouraged by the recent progress in self-supervised learning, this study proposes and evaluates a novel multiview contrastive representation learning to boost the models from unlabelled data. The proposed learning architecture leverages three views of CTs (coronal, sagittal, and transverse plane) to collect positive and negative training samples. Specifically, a CT in 3D is first projected into three 2D views (coronal, sagittal, and transverse planes), then a convolutional neural network takes 3 views as inputs and outputs three individual representations in latent space, and finally, a contrastive loss is used to pull representation of different views of the same image closer (“positive pairs”) and push representations of views from different images (“negative pairs”) apart. To evaluate performance, we collected 220 CT images in H&N cancer patients. The experiment demonstrates that our method significantly improves quantitative performance over the state-of-the-art (from 83% to 86% in absolute Dice scores). Thus, our method provides a powerful and principled means to deal with the label-scarce problem. Hindawi 2021-03-05 /pmc/articles/PMC7954615/ /pubmed/33747116 http://dx.doi.org/10.1155/2021/8894222 Text en Copyright © 2021 Cong Liu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Liu, Cong
Zhang, Xiaofei
Si, Wen
Ni, Xinye
Multiview Self-Supervised Segmentation for OARs Delineation in Radiotherapy
title Multiview Self-Supervised Segmentation for OARs Delineation in Radiotherapy
title_full Multiview Self-Supervised Segmentation for OARs Delineation in Radiotherapy
title_fullStr Multiview Self-Supervised Segmentation for OARs Delineation in Radiotherapy
title_full_unstemmed Multiview Self-Supervised Segmentation for OARs Delineation in Radiotherapy
title_short Multiview Self-Supervised Segmentation for OARs Delineation in Radiotherapy
title_sort multiview self-supervised segmentation for oars delineation in radiotherapy
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954615/
https://www.ncbi.nlm.nih.gov/pubmed/33747116
http://dx.doi.org/10.1155/2021/8894222
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