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Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P(450) enzymes

2,5-Diketopiperazines are the smallest cyclic peptides comprising two amino acids connected via two peptide bonds. They can be biosynthesized in nature by two different enzyme families, either by nonribosomal peptide synthetases or by cyclodipeptide synthases. Due to the stable scaffold of the diket...

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Autores principales: Harken, Lauritz, Li, Shu-Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954767/
https://www.ncbi.nlm.nih.gov/pubmed/33625545
http://dx.doi.org/10.1007/s00253-021-11178-1
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author Harken, Lauritz
Li, Shu-Ming
author_facet Harken, Lauritz
Li, Shu-Ming
author_sort Harken, Lauritz
collection PubMed
description 2,5-Diketopiperazines are the smallest cyclic peptides comprising two amino acids connected via two peptide bonds. They can be biosynthesized in nature by two different enzyme families, either by nonribosomal peptide synthetases or by cyclodipeptide synthases. Due to the stable scaffold of the diketopiperazine ring, they can serve as precursors for further modifications by different tailoring enzymes, such as methyltransferases, prenyltransferases, oxidoreductases like cyclodipeptide oxidases, 2-oxoglutarate-dependent monooxygenases and cytochrome P(450) enzymes, leading to the formation of intriguing secondary metabolites. Among them, cyclodipeptide synthase-associated P(450)s attracted recently significant attention, since they are able to catalyse a broader variety of astonishing reactions than just oxidation by insertion of an oxygen. The P(450)-catalysed reactions include hydroxylation at a tertiary carbon, aromatisation of the diketopiperazine ring, intramolecular and intermolecular carbon-carbon and carbon-nitrogen bond formation of cyclodipeptides and nucleobase transfer reactions. Elucidation of the crystal structures of three P(450)s as cyclodipeptide dimerases provides a structural basis for understanding the reaction mechanism and generating new enzymes by protein engineering. This review summarises recent publications on cyclodipeptide modifications by P(450)s. Key Points • Intriguing reactions catalysed by cyclodipeptide synthase-associated cytochrome P(450)s • Homo- and heterodimerisation of diketopiperazines • Coupling of guanine and hypoxanthine with diketopiperazines [Image: see text]
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spelling pubmed-79547672021-03-28 Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P(450) enzymes Harken, Lauritz Li, Shu-Ming Appl Microbiol Biotechnol Mini-Review 2,5-Diketopiperazines are the smallest cyclic peptides comprising two amino acids connected via two peptide bonds. They can be biosynthesized in nature by two different enzyme families, either by nonribosomal peptide synthetases or by cyclodipeptide synthases. Due to the stable scaffold of the diketopiperazine ring, they can serve as precursors for further modifications by different tailoring enzymes, such as methyltransferases, prenyltransferases, oxidoreductases like cyclodipeptide oxidases, 2-oxoglutarate-dependent monooxygenases and cytochrome P(450) enzymes, leading to the formation of intriguing secondary metabolites. Among them, cyclodipeptide synthase-associated P(450)s attracted recently significant attention, since they are able to catalyse a broader variety of astonishing reactions than just oxidation by insertion of an oxygen. The P(450)-catalysed reactions include hydroxylation at a tertiary carbon, aromatisation of the diketopiperazine ring, intramolecular and intermolecular carbon-carbon and carbon-nitrogen bond formation of cyclodipeptides and nucleobase transfer reactions. Elucidation of the crystal structures of three P(450)s as cyclodipeptide dimerases provides a structural basis for understanding the reaction mechanism and generating new enzymes by protein engineering. This review summarises recent publications on cyclodipeptide modifications by P(450)s. Key Points • Intriguing reactions catalysed by cyclodipeptide synthase-associated cytochrome P(450)s • Homo- and heterodimerisation of diketopiperazines • Coupling of guanine and hypoxanthine with diketopiperazines [Image: see text] Springer Berlin Heidelberg 2021-02-24 2021 /pmc/articles/PMC7954767/ /pubmed/33625545 http://dx.doi.org/10.1007/s00253-021-11178-1 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Mini-Review
Harken, Lauritz
Li, Shu-Ming
Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P(450) enzymes
title Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P(450) enzymes
title_full Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P(450) enzymes
title_fullStr Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P(450) enzymes
title_full_unstemmed Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P(450) enzymes
title_short Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P(450) enzymes
title_sort modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome p(450) enzymes
topic Mini-Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7954767/
https://www.ncbi.nlm.nih.gov/pubmed/33625545
http://dx.doi.org/10.1007/s00253-021-11178-1
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