Cargando…
Ferroptosis‐related gene signature as a prognostic marker for lower‐grade gliomas
Ferroptosis is a newly discovered form of programmed cell death, which has unique biological effects on metabolism and redox biology. In this study, the prognostic value of ferroptosis‐related genes was investigated in lower‐grade gliomas (LGG). We downloaded the ferroptosis‐related genes from the F...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7957186/ https://www.ncbi.nlm.nih.gov/pubmed/33594759 http://dx.doi.org/10.1111/jcmm.16368 |
_version_ | 1783664601037012992 |
---|---|
author | Zheng, Yi Ji, Qiang Xie, Lei Wang, Can Yu, Chun‐Na Wang, Ya‐Li Jiang, Jing Chen, Feng Li, Wen‐Bin |
author_facet | Zheng, Yi Ji, Qiang Xie, Lei Wang, Can Yu, Chun‐Na Wang, Ya‐Li Jiang, Jing Chen, Feng Li, Wen‐Bin |
author_sort | Zheng, Yi |
collection | PubMed |
description | Ferroptosis is a newly discovered form of programmed cell death, which has unique biological effects on metabolism and redox biology. In this study, the prognostic value of ferroptosis‐related genes was investigated in lower‐grade gliomas (LGG). We downloaded the ferroptosis‐related genes from the FerrDb dataset. Univariate Cox and LASSO regression analyses were applied to identify genes correlated with overall survival (OS). Subsequently, 12 ferroptosis‐related genes were screened to establish the prognostic signature using stepwise multivariate Cox regression. According to the median value of risk scores, patients were divided into low‐ and high‐risk subgroups. The Kaplan‐Meier curves showed the high‐risk group had a lower OS. The predictive power of the risk model was validated using the CGGA. Functional analysis revealed that the terms associated with plasma membrane receptor complex, immune response and glutamate metabolic process were primarily related to the risk model. Moreover, we established a nomogram that had a strong forecasting ability for the 1‐, 3‐ and 5‐year OS. In addition, we compared the risk scores between different clinical features. We also detected infiltration of macrophages and monocytes in different subgroups. Overall, our study identified the prognostic signature of 12 ferroptosis‐related genes, which has the potential to predict the prognosis of LGG. |
format | Online Article Text |
id | pubmed-7957186 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-79571862021-03-19 Ferroptosis‐related gene signature as a prognostic marker for lower‐grade gliomas Zheng, Yi Ji, Qiang Xie, Lei Wang, Can Yu, Chun‐Na Wang, Ya‐Li Jiang, Jing Chen, Feng Li, Wen‐Bin J Cell Mol Med Original Articles Ferroptosis is a newly discovered form of programmed cell death, which has unique biological effects on metabolism and redox biology. In this study, the prognostic value of ferroptosis‐related genes was investigated in lower‐grade gliomas (LGG). We downloaded the ferroptosis‐related genes from the FerrDb dataset. Univariate Cox and LASSO regression analyses were applied to identify genes correlated with overall survival (OS). Subsequently, 12 ferroptosis‐related genes were screened to establish the prognostic signature using stepwise multivariate Cox regression. According to the median value of risk scores, patients were divided into low‐ and high‐risk subgroups. The Kaplan‐Meier curves showed the high‐risk group had a lower OS. The predictive power of the risk model was validated using the CGGA. Functional analysis revealed that the terms associated with plasma membrane receptor complex, immune response and glutamate metabolic process were primarily related to the risk model. Moreover, we established a nomogram that had a strong forecasting ability for the 1‐, 3‐ and 5‐year OS. In addition, we compared the risk scores between different clinical features. We also detected infiltration of macrophages and monocytes in different subgroups. Overall, our study identified the prognostic signature of 12 ferroptosis‐related genes, which has the potential to predict the prognosis of LGG. John Wiley and Sons Inc. 2021-02-16 2021-03 /pmc/articles/PMC7957186/ /pubmed/33594759 http://dx.doi.org/10.1111/jcmm.16368 Text en © 2021 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Zheng, Yi Ji, Qiang Xie, Lei Wang, Can Yu, Chun‐Na Wang, Ya‐Li Jiang, Jing Chen, Feng Li, Wen‐Bin Ferroptosis‐related gene signature as a prognostic marker for lower‐grade gliomas |
title | Ferroptosis‐related gene signature as a prognostic marker for lower‐grade gliomas |
title_full | Ferroptosis‐related gene signature as a prognostic marker for lower‐grade gliomas |
title_fullStr | Ferroptosis‐related gene signature as a prognostic marker for lower‐grade gliomas |
title_full_unstemmed | Ferroptosis‐related gene signature as a prognostic marker for lower‐grade gliomas |
title_short | Ferroptosis‐related gene signature as a prognostic marker for lower‐grade gliomas |
title_sort | ferroptosis‐related gene signature as a prognostic marker for lower‐grade gliomas |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7957186/ https://www.ncbi.nlm.nih.gov/pubmed/33594759 http://dx.doi.org/10.1111/jcmm.16368 |
work_keys_str_mv | AT zhengyi ferroptosisrelatedgenesignatureasaprognosticmarkerforlowergradegliomas AT jiqiang ferroptosisrelatedgenesignatureasaprognosticmarkerforlowergradegliomas AT xielei ferroptosisrelatedgenesignatureasaprognosticmarkerforlowergradegliomas AT wangcan ferroptosisrelatedgenesignatureasaprognosticmarkerforlowergradegliomas AT yuchunna ferroptosisrelatedgenesignatureasaprognosticmarkerforlowergradegliomas AT wangyali ferroptosisrelatedgenesignatureasaprognosticmarkerforlowergradegliomas AT jiangjing ferroptosisrelatedgenesignatureasaprognosticmarkerforlowergradegliomas AT chenfeng ferroptosisrelatedgenesignatureasaprognosticmarkerforlowergradegliomas AT liwenbin ferroptosisrelatedgenesignatureasaprognosticmarkerforlowergradegliomas |