Genetic Predictors of Chemotherapy-Induced Peripheral Neuropathy from Paclitaxel, Carboplatin and Oxaliplatin: NCCTG/Alliance N08C1, N08CA and N08CB Study

SIMPLE SUMMARY: Chemotherapy-induced peripheral neuropathy (CIPN) is a common debilitating complication of treatment with platinum-based compounds and taxanes. CIPN is predominantly a sensory symptom, causing numbness, tingling, and pain in the hands and/or feet. We performed a genome-wide association study on two independent study groups (N08Cx comprised of NCCTG clinical trial participants in the N08C1, N08CA, and N08CB studies; and Mayo Clinic Breast Disease Registry (MCBDR)) to find genetic variants that are associated with sensory symptoms during or after paclitaxel, paclitaxel and carboplatin, or oxaliplatin receipt. A genetic variant (single nucleotide polymorphism, SNP) rs56360211 near PDE6C had a very strong association with CIPN in N08Cx but not in the MCBDR, while the variant rs113807868 near TMEM150C was significantly associated with CIPN in the MCBDR but not in N08Cx. This lack of replication suggests that neither is actually strongly associated with CIPN. ABSTRACT: Chemotherapy-induced peripheral neuropathy (CIPN) is a common and potentially permanent adverse effect of chemotherapeutic agents including taxanes such as paclitaxel and platinum-based compounds such as oxaliplatin and carboplatin. Previous studies have suggested that genetics may impact the risk of CIPN. We conducted genome-wide association studies (GWASs) for CIPN in two independent populations who had completed European Organisation for Research and Treatment of Cancer Quality of Life Questionnaire (EORTC QLQ)-CIPN20 assessments (a CIPN-specific 20-item questionnaire which includes three scales that evaluate sensory, autonomic, and motor symptoms). The study population N08Cx included 692 participants from three clinical trials (North Central Cancer Treatment Group (NCCTG) N08C1, N08CA, and N08CB) who had been treated with paclitaxel, paclitaxel plus carboplatin, or oxaliplatin. The primary endpoint for the GWAS was the change from pre-chemotherapy CIPN20 sensory score to the worse score over the following 18 weeks. Study population The Mayo Clinic Breast Disease Registry (MCBDR) consisted of 381 Mayo Clinic Breast Disease Registry enrollees who had been treated with taxane or platinum-based chemotherapy. The primary endpoint for the GWAS assessed was the earliest CIPN20 sensory score available after the completion of chemotherapy. In multivariate model analyses, chemotherapy regimen (p = 3.0 × 10(−8)) and genetic ancestry (p = 0.007) were significantly associated with CIPN in the N08Cx population. Only age (p = 0.0004) was significantly associated with CIPN in the MCBDR population. The SNP most associated with CIPN was rs56360211 near PDE6C (p =7.92 × 10(−8)) in N08Cx and rs113807868 near TMEM150C in the MCBDR (p = 1.27 × 10(−8)). Due to a lack of replication, we cannot conclude that we identified any genetic predictors of CIPN.