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Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images
Among aquatic biota, corals provide shelter with sufficient nutrition to a wide variety of underwater life. However, a severe decline in the coral resources can be noted in the last decades due to global environmental changes causing marine pollution. Hence, it is of paramount importance to develop...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7961541/ https://www.ncbi.nlm.nih.gov/pubmed/33800839 http://dx.doi.org/10.3390/s21051848 |
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author | Song, Hong Mehdi, Syed Raza Zhang, Yangfan Shentu, Yichun Wan, Qixin Wang, Wenxin Raza, Kazim Huang, Hui |
author_facet | Song, Hong Mehdi, Syed Raza Zhang, Yangfan Shentu, Yichun Wan, Qixin Wang, Wenxin Raza, Kazim Huang, Hui |
author_sort | Song, Hong |
collection | PubMed |
description | Among aquatic biota, corals provide shelter with sufficient nutrition to a wide variety of underwater life. However, a severe decline in the coral resources can be noted in the last decades due to global environmental changes causing marine pollution. Hence, it is of paramount importance to develop and deploy swift coral monitoring system to alleviate the destruction of corals. Performing semantic segmentation on underwater images is one of the most efficient methods for automatic investigation of corals. Firstly, to design a coral investigation system, RGB and spectral images of various types of corals in natural and artificial aquatic sites are collected. Based on single-channel images, a convolutional neural network (CNN) model, named DeeperLabC, is employed for the semantic segmentation of corals, which is a concise and modified deeperlab model with encoder-decoder architecture. Using ResNet34 as a skeleton network, the proposed model extracts coral features in the images and performs semantic segmentation. DeeperLabC achieved state-of-the-art coral segmentation with an overall mean intersection over union (IoU) value of 93.90%, and maximum F1-score of 97.10% which surpassed other existing benchmark neural networks for semantic segmentation. The class activation map (CAM) module also proved the excellent performance of the DeeperLabC model in binary classification among coral and non-coral bodies. |
format | Online Article Text |
id | pubmed-7961541 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-79615412021-03-17 Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images Song, Hong Mehdi, Syed Raza Zhang, Yangfan Shentu, Yichun Wan, Qixin Wang, Wenxin Raza, Kazim Huang, Hui Sensors (Basel) Article Among aquatic biota, corals provide shelter with sufficient nutrition to a wide variety of underwater life. However, a severe decline in the coral resources can be noted in the last decades due to global environmental changes causing marine pollution. Hence, it is of paramount importance to develop and deploy swift coral monitoring system to alleviate the destruction of corals. Performing semantic segmentation on underwater images is one of the most efficient methods for automatic investigation of corals. Firstly, to design a coral investigation system, RGB and spectral images of various types of corals in natural and artificial aquatic sites are collected. Based on single-channel images, a convolutional neural network (CNN) model, named DeeperLabC, is employed for the semantic segmentation of corals, which is a concise and modified deeperlab model with encoder-decoder architecture. Using ResNet34 as a skeleton network, the proposed model extracts coral features in the images and performs semantic segmentation. DeeperLabC achieved state-of-the-art coral segmentation with an overall mean intersection over union (IoU) value of 93.90%, and maximum F1-score of 97.10% which surpassed other existing benchmark neural networks for semantic segmentation. The class activation map (CAM) module also proved the excellent performance of the DeeperLabC model in binary classification among coral and non-coral bodies. MDPI 2021-03-06 /pmc/articles/PMC7961541/ /pubmed/33800839 http://dx.doi.org/10.3390/s21051848 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Song, Hong Mehdi, Syed Raza Zhang, Yangfan Shentu, Yichun Wan, Qixin Wang, Wenxin Raza, Kazim Huang, Hui Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images |
title | Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images |
title_full | Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images |
title_fullStr | Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images |
title_full_unstemmed | Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images |
title_short | Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images |
title_sort | development of coral investigation system based on semantic segmentation of single-channel images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7961541/ https://www.ncbi.nlm.nih.gov/pubmed/33800839 http://dx.doi.org/10.3390/s21051848 |
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