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Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images

Among aquatic biota, corals provide shelter with sufficient nutrition to a wide variety of underwater life. However, a severe decline in the coral resources can be noted in the last decades due to global environmental changes causing marine pollution. Hence, it is of paramount importance to develop...

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Autores principales: Song, Hong, Mehdi, Syed Raza, Zhang, Yangfan, Shentu, Yichun, Wan, Qixin, Wang, Wenxin, Raza, Kazim, Huang, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7961541/
https://www.ncbi.nlm.nih.gov/pubmed/33800839
http://dx.doi.org/10.3390/s21051848
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author Song, Hong
Mehdi, Syed Raza
Zhang, Yangfan
Shentu, Yichun
Wan, Qixin
Wang, Wenxin
Raza, Kazim
Huang, Hui
author_facet Song, Hong
Mehdi, Syed Raza
Zhang, Yangfan
Shentu, Yichun
Wan, Qixin
Wang, Wenxin
Raza, Kazim
Huang, Hui
author_sort Song, Hong
collection PubMed
description Among aquatic biota, corals provide shelter with sufficient nutrition to a wide variety of underwater life. However, a severe decline in the coral resources can be noted in the last decades due to global environmental changes causing marine pollution. Hence, it is of paramount importance to develop and deploy swift coral monitoring system to alleviate the destruction of corals. Performing semantic segmentation on underwater images is one of the most efficient methods for automatic investigation of corals. Firstly, to design a coral investigation system, RGB and spectral images of various types of corals in natural and artificial aquatic sites are collected. Based on single-channel images, a convolutional neural network (CNN) model, named DeeperLabC, is employed for the semantic segmentation of corals, which is a concise and modified deeperlab model with encoder-decoder architecture. Using ResNet34 as a skeleton network, the proposed model extracts coral features in the images and performs semantic segmentation. DeeperLabC achieved state-of-the-art coral segmentation with an overall mean intersection over union (IoU) value of 93.90%, and maximum F1-score of 97.10% which surpassed other existing benchmark neural networks for semantic segmentation. The class activation map (CAM) module also proved the excellent performance of the DeeperLabC model in binary classification among coral and non-coral bodies.
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spelling pubmed-79615412021-03-17 Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images Song, Hong Mehdi, Syed Raza Zhang, Yangfan Shentu, Yichun Wan, Qixin Wang, Wenxin Raza, Kazim Huang, Hui Sensors (Basel) Article Among aquatic biota, corals provide shelter with sufficient nutrition to a wide variety of underwater life. However, a severe decline in the coral resources can be noted in the last decades due to global environmental changes causing marine pollution. Hence, it is of paramount importance to develop and deploy swift coral monitoring system to alleviate the destruction of corals. Performing semantic segmentation on underwater images is one of the most efficient methods for automatic investigation of corals. Firstly, to design a coral investigation system, RGB and spectral images of various types of corals in natural and artificial aquatic sites are collected. Based on single-channel images, a convolutional neural network (CNN) model, named DeeperLabC, is employed for the semantic segmentation of corals, which is a concise and modified deeperlab model with encoder-decoder architecture. Using ResNet34 as a skeleton network, the proposed model extracts coral features in the images and performs semantic segmentation. DeeperLabC achieved state-of-the-art coral segmentation with an overall mean intersection over union (IoU) value of 93.90%, and maximum F1-score of 97.10% which surpassed other existing benchmark neural networks for semantic segmentation. The class activation map (CAM) module also proved the excellent performance of the DeeperLabC model in binary classification among coral and non-coral bodies. MDPI 2021-03-06 /pmc/articles/PMC7961541/ /pubmed/33800839 http://dx.doi.org/10.3390/s21051848 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Song, Hong
Mehdi, Syed Raza
Zhang, Yangfan
Shentu, Yichun
Wan, Qixin
Wang, Wenxin
Raza, Kazim
Huang, Hui
Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images
title Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images
title_full Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images
title_fullStr Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images
title_full_unstemmed Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images
title_short Development of Coral Investigation System Based on Semantic Segmentation of Single-Channel Images
title_sort development of coral investigation system based on semantic segmentation of single-channel images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7961541/
https://www.ncbi.nlm.nih.gov/pubmed/33800839
http://dx.doi.org/10.3390/s21051848
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