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NOTCH1: Review of its role in lymphatic development and study of seven families with rare pathogenic variants

BACKGROUND: We developed a Next‐Generation‐Sequencing (NGS) protocol to screen the most frequent genetic variants related to lymphedema and a group of candidate genes. The aim of the study was to find the genetic cause of lymphedema in the analyzed patients. METHODS: We sequenced a cohort of 246 Ita...

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Autores principales: Michelini, Sandro, Ricci, Maurizio, Serrani, Roberta, Barati, Shila, Kenanoglu, Sercan, Veselenyiova, Dominika, Kurti, Danjela, Baglivo, Mirko, Basha, Syed Hussain, Priya, Sasi, Dautaj, Astrit, Dundar, Munis, Krajcovic, Juraj, Bertelli, Matteo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7963424/
https://www.ncbi.nlm.nih.gov/pubmed/33247628
http://dx.doi.org/10.1002/mgg3.1529
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author Michelini, Sandro
Ricci, Maurizio
Serrani, Roberta
Barati, Shila
Kenanoglu, Sercan
Veselenyiova, Dominika
Kurti, Danjela
Baglivo, Mirko
Basha, Syed Hussain
Priya, Sasi
Dautaj, Astrit
Dundar, Munis
Krajcovic, Juraj
Bertelli, Matteo
author_facet Michelini, Sandro
Ricci, Maurizio
Serrani, Roberta
Barati, Shila
Kenanoglu, Sercan
Veselenyiova, Dominika
Kurti, Danjela
Baglivo, Mirko
Basha, Syed Hussain
Priya, Sasi
Dautaj, Astrit
Dundar, Munis
Krajcovic, Juraj
Bertelli, Matteo
author_sort Michelini, Sandro
collection PubMed
description BACKGROUND: We developed a Next‐Generation‐Sequencing (NGS) protocol to screen the most frequent genetic variants related to lymphedema and a group of candidate genes. The aim of the study was to find the genetic cause of lymphedema in the analyzed patients. METHODS: We sequenced a cohort of 246 Italian patients with lymphatic malformations. In the first step, we analyzed genes known to be linked to lymphedema: 235 out of 246 patients tested negative for the most frequent variants and underwent testing for variants in a group of candidate genes, including the NOTCH1 gene, selected from the database of mouse models. We also performed in silico analysis to observe molecular interactions between the wild‐type and the variant amino acids and other protein residues. RESULTS: Seven out of 235 probands, five with sporadic and two with familial lymphedema, were found to carry rare missense variants in the NOTCH1 gene. CONCLUSIONS: Our results propose that NOTCH1 could be a novel candidate for genetic predisposition to lymphedema.
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spelling pubmed-79634242021-03-19 NOTCH1: Review of its role in lymphatic development and study of seven families with rare pathogenic variants Michelini, Sandro Ricci, Maurizio Serrani, Roberta Barati, Shila Kenanoglu, Sercan Veselenyiova, Dominika Kurti, Danjela Baglivo, Mirko Basha, Syed Hussain Priya, Sasi Dautaj, Astrit Dundar, Munis Krajcovic, Juraj Bertelli, Matteo Mol Genet Genomic Med Original Articles BACKGROUND: We developed a Next‐Generation‐Sequencing (NGS) protocol to screen the most frequent genetic variants related to lymphedema and a group of candidate genes. The aim of the study was to find the genetic cause of lymphedema in the analyzed patients. METHODS: We sequenced a cohort of 246 Italian patients with lymphatic malformations. In the first step, we analyzed genes known to be linked to lymphedema: 235 out of 246 patients tested negative for the most frequent variants and underwent testing for variants in a group of candidate genes, including the NOTCH1 gene, selected from the database of mouse models. We also performed in silico analysis to observe molecular interactions between the wild‐type and the variant amino acids and other protein residues. RESULTS: Seven out of 235 probands, five with sporadic and two with familial lymphedema, were found to carry rare missense variants in the NOTCH1 gene. CONCLUSIONS: Our results propose that NOTCH1 could be a novel candidate for genetic predisposition to lymphedema. John Wiley and Sons Inc. 2020-11-28 /pmc/articles/PMC7963424/ /pubmed/33247628 http://dx.doi.org/10.1002/mgg3.1529 Text en © 2020 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Michelini, Sandro
Ricci, Maurizio
Serrani, Roberta
Barati, Shila
Kenanoglu, Sercan
Veselenyiova, Dominika
Kurti, Danjela
Baglivo, Mirko
Basha, Syed Hussain
Priya, Sasi
Dautaj, Astrit
Dundar, Munis
Krajcovic, Juraj
Bertelli, Matteo
NOTCH1: Review of its role in lymphatic development and study of seven families with rare pathogenic variants
title NOTCH1: Review of its role in lymphatic development and study of seven families with rare pathogenic variants
title_full NOTCH1: Review of its role in lymphatic development and study of seven families with rare pathogenic variants
title_fullStr NOTCH1: Review of its role in lymphatic development and study of seven families with rare pathogenic variants
title_full_unstemmed NOTCH1: Review of its role in lymphatic development and study of seven families with rare pathogenic variants
title_short NOTCH1: Review of its role in lymphatic development and study of seven families with rare pathogenic variants
title_sort notch1: review of its role in lymphatic development and study of seven families with rare pathogenic variants
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7963424/
https://www.ncbi.nlm.nih.gov/pubmed/33247628
http://dx.doi.org/10.1002/mgg3.1529
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