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External validation of an opioid misuse machine learning classifier in hospitalized adult patients
BACKGROUND: Opioid misuse screening in hospitals is resource-intensive and rarely done. Many hospitalized patients are never offered opioid treatment. An automated approach leveraging routinely captured electronic health record (EHR) data may be easier for hospitals to institute. We previously deriv...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7967783/ https://www.ncbi.nlm.nih.gov/pubmed/33731210 http://dx.doi.org/10.1186/s13722-021-00229-7 |
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author | Afshar, Majid Sharma, Brihat Bhalla, Sameer Thompson, Hale M. Dligach, Dmitriy Boley, Randy A. Kishen, Ekta Simmons, Alan Perticone, Kathryn Karnik, Niranjan S. |
author_facet | Afshar, Majid Sharma, Brihat Bhalla, Sameer Thompson, Hale M. Dligach, Dmitriy Boley, Randy A. Kishen, Ekta Simmons, Alan Perticone, Kathryn Karnik, Niranjan S. |
author_sort | Afshar, Majid |
collection | PubMed |
description | BACKGROUND: Opioid misuse screening in hospitals is resource-intensive and rarely done. Many hospitalized patients are never offered opioid treatment. An automated approach leveraging routinely captured electronic health record (EHR) data may be easier for hospitals to institute. We previously derived and internally validated an opioid classifier in a separate hospital setting. The aim is to externally validate our previously published and open-source machine-learning classifier at a different hospital for identifying cases of opioid misuse. METHODS: An observational cohort of 56,227 adult hospitalizations was examined between October 2017 and December 2019 during a hospital-wide substance use screening program with manual screening. Manually completed Drug Abuse Screening Test served as the reference standard to validate a convolutional neural network (CNN) classifier with coded word embedding features from the clinical notes of the EHR. The opioid classifier utilized all notes in the EHR and sensitivity analysis was also performed on the first 24 h of notes. Calibration was performed to account for the lower prevalence than in the original cohort. RESULTS: Manual screening for substance misuse was completed in 67.8% (n = 56,227) with 1.1% (n = 628) identified with opioid misuse. The data for external validation included 2,482,900 notes with 67,969 unique clinical concept features. The opioid classifier had an AUC of 0.99 (95% CI 0.99–0.99) across the encounter and 0.98 (95% CI 0.98–0.99) using only the first 24 h of notes. In the calibrated classifier, the sensitivity and positive predictive value were 0.81 (95% CI 0.77–0.84) and 0.72 (95% CI 0.68–0.75). For the first 24 h, they were 0.75 (95% CI 0.71–0.78) and 0.61 (95% CI 0.57–0.64). CONCLUSIONS: Our opioid misuse classifier had good discrimination during external validation. Our model may provide a comprehensive and automated approach to opioid misuse identification that augments current workflows and overcomes manual screening barriers. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13722-021-00229-7. |
format | Online Article Text |
id | pubmed-7967783 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-79677832021-03-17 External validation of an opioid misuse machine learning classifier in hospitalized adult patients Afshar, Majid Sharma, Brihat Bhalla, Sameer Thompson, Hale M. Dligach, Dmitriy Boley, Randy A. Kishen, Ekta Simmons, Alan Perticone, Kathryn Karnik, Niranjan S. Addict Sci Clin Pract Research BACKGROUND: Opioid misuse screening in hospitals is resource-intensive and rarely done. Many hospitalized patients are never offered opioid treatment. An automated approach leveraging routinely captured electronic health record (EHR) data may be easier for hospitals to institute. We previously derived and internally validated an opioid classifier in a separate hospital setting. The aim is to externally validate our previously published and open-source machine-learning classifier at a different hospital for identifying cases of opioid misuse. METHODS: An observational cohort of 56,227 adult hospitalizations was examined between October 2017 and December 2019 during a hospital-wide substance use screening program with manual screening. Manually completed Drug Abuse Screening Test served as the reference standard to validate a convolutional neural network (CNN) classifier with coded word embedding features from the clinical notes of the EHR. The opioid classifier utilized all notes in the EHR and sensitivity analysis was also performed on the first 24 h of notes. Calibration was performed to account for the lower prevalence than in the original cohort. RESULTS: Manual screening for substance misuse was completed in 67.8% (n = 56,227) with 1.1% (n = 628) identified with opioid misuse. The data for external validation included 2,482,900 notes with 67,969 unique clinical concept features. The opioid classifier had an AUC of 0.99 (95% CI 0.99–0.99) across the encounter and 0.98 (95% CI 0.98–0.99) using only the first 24 h of notes. In the calibrated classifier, the sensitivity and positive predictive value were 0.81 (95% CI 0.77–0.84) and 0.72 (95% CI 0.68–0.75). For the first 24 h, they were 0.75 (95% CI 0.71–0.78) and 0.61 (95% CI 0.57–0.64). CONCLUSIONS: Our opioid misuse classifier had good discrimination during external validation. Our model may provide a comprehensive and automated approach to opioid misuse identification that augments current workflows and overcomes manual screening barriers. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13722-021-00229-7. BioMed Central 2021-03-17 2021 /pmc/articles/PMC7967783/ /pubmed/33731210 http://dx.doi.org/10.1186/s13722-021-00229-7 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Afshar, Majid Sharma, Brihat Bhalla, Sameer Thompson, Hale M. Dligach, Dmitriy Boley, Randy A. Kishen, Ekta Simmons, Alan Perticone, Kathryn Karnik, Niranjan S. External validation of an opioid misuse machine learning classifier in hospitalized adult patients |
title | External validation of an opioid misuse machine learning classifier in hospitalized adult patients |
title_full | External validation of an opioid misuse machine learning classifier in hospitalized adult patients |
title_fullStr | External validation of an opioid misuse machine learning classifier in hospitalized adult patients |
title_full_unstemmed | External validation of an opioid misuse machine learning classifier in hospitalized adult patients |
title_short | External validation of an opioid misuse machine learning classifier in hospitalized adult patients |
title_sort | external validation of an opioid misuse machine learning classifier in hospitalized adult patients |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7967783/ https://www.ncbi.nlm.nih.gov/pubmed/33731210 http://dx.doi.org/10.1186/s13722-021-00229-7 |
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