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Expression patterns and prognostic value of m(6)A RNA methylation regulators in adrenocortical carcinoma

Adrenocortical carcinoma (ACC) is considered a rare cancer with poor prognosis. We used public datasets from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) databases to assess the relationships between N6-methyladenosine (m(6)A)-related genes and ACC. We used the Wilcoxon signe...

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Autores principales: Fu, Yang, Sun, Shanshan, Bi, Jianbin, Kong, Chuize, Yin, Lei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7969304/
https://www.ncbi.nlm.nih.gov/pubmed/33725886
http://dx.doi.org/10.1097/MD.0000000000025031
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author Fu, Yang
Sun, Shanshan
Bi, Jianbin
Kong, Chuize
Yin, Lei
author_facet Fu, Yang
Sun, Shanshan
Bi, Jianbin
Kong, Chuize
Yin, Lei
author_sort Fu, Yang
collection PubMed
description Adrenocortical carcinoma (ACC) is considered a rare cancer with poor prognosis. We used public datasets from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) databases to assess the relationships between N6-methyladenosine (m(6)A)-related genes and ACC. We used the Wilcoxon signed-rank test to compare m(6)A-related gene expression in ACC tissues with that in normal tissues. Then, ACC patients were grouped based on a cluster analysis of m(6)A-related gene expression. m(6)A-related genes that were significantly associated with survival were incorporated into a risk signature, and 2 groups were divided according to median risk score. Fisher exact tests were utilized to analyze differences in clinical variables between groups. We compared the overall survival (OS) rates of the groups by means of Kaplan–Meier curves and Cox regression analyses. We found that RBM15, ZC3H3, YTDHF1, YTDHF2, and ALBH5 were overexpressed in ACC and that KIAA1429, YTHDC1, HNRNPC, WTAP, METTL3, and FTO were down regulated in ACC. In addition, membership in cluster 2 or the high-risk group was associated with advanced clinical factors and poor prognosis. The univariable and multivariable Cox regression analyses showed that risk score can be considered an independent prognostic factor for ACC. We found that the expression of m(6)A-related genes could be used as an independent prognostic factor in ACC. However, the current study has some limitations, and further studies of m(6)A-related genes in ACC are needed.
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spelling pubmed-79693042021-03-18 Expression patterns and prognostic value of m(6)A RNA methylation regulators in adrenocortical carcinoma Fu, Yang Sun, Shanshan Bi, Jianbin Kong, Chuize Yin, Lei Medicine (Baltimore) 3500 Adrenocortical carcinoma (ACC) is considered a rare cancer with poor prognosis. We used public datasets from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) databases to assess the relationships between N6-methyladenosine (m(6)A)-related genes and ACC. We used the Wilcoxon signed-rank test to compare m(6)A-related gene expression in ACC tissues with that in normal tissues. Then, ACC patients were grouped based on a cluster analysis of m(6)A-related gene expression. m(6)A-related genes that were significantly associated with survival were incorporated into a risk signature, and 2 groups were divided according to median risk score. Fisher exact tests were utilized to analyze differences in clinical variables between groups. We compared the overall survival (OS) rates of the groups by means of Kaplan–Meier curves and Cox regression analyses. We found that RBM15, ZC3H3, YTDHF1, YTDHF2, and ALBH5 were overexpressed in ACC and that KIAA1429, YTHDC1, HNRNPC, WTAP, METTL3, and FTO were down regulated in ACC. In addition, membership in cluster 2 or the high-risk group was associated with advanced clinical factors and poor prognosis. The univariable and multivariable Cox regression analyses showed that risk score can be considered an independent prognostic factor for ACC. We found that the expression of m(6)A-related genes could be used as an independent prognostic factor in ACC. However, the current study has some limitations, and further studies of m(6)A-related genes in ACC are needed. Lippincott Williams & Wilkins 2021-03-12 /pmc/articles/PMC7969304/ /pubmed/33725886 http://dx.doi.org/10.1097/MD.0000000000025031 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by/4.0
spellingShingle 3500
Fu, Yang
Sun, Shanshan
Bi, Jianbin
Kong, Chuize
Yin, Lei
Expression patterns and prognostic value of m(6)A RNA methylation regulators in adrenocortical carcinoma
title Expression patterns and prognostic value of m(6)A RNA methylation regulators in adrenocortical carcinoma
title_full Expression patterns and prognostic value of m(6)A RNA methylation regulators in adrenocortical carcinoma
title_fullStr Expression patterns and prognostic value of m(6)A RNA methylation regulators in adrenocortical carcinoma
title_full_unstemmed Expression patterns and prognostic value of m(6)A RNA methylation regulators in adrenocortical carcinoma
title_short Expression patterns and prognostic value of m(6)A RNA methylation regulators in adrenocortical carcinoma
title_sort expression patterns and prognostic value of m(6)a rna methylation regulators in adrenocortical carcinoma
topic 3500
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7969304/
https://www.ncbi.nlm.nih.gov/pubmed/33725886
http://dx.doi.org/10.1097/MD.0000000000025031
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