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Identifying the predictors of Covid-19 infection outcomes and development of prediction models

BACKGROUND: The infection of Corona Virus Disease (Covid-19) is challenging health problems worldwide. COVID-19 pandemic is spreading all over the world with the number of infected cases increased to 54.4 million with 1.32 million deaths. Different types of statistical models have been developed to...

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Autores principales: Ansari, Rashid M., Baker, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Author(s). Published by Elsevier Ltd on behalf of King Saud Bin Abdulaziz University for Health Sciences. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7970794/
https://www.ncbi.nlm.nih.gov/pubmed/34022732
http://dx.doi.org/10.1016/j.jiph.2021.03.006
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author Ansari, Rashid M.
Baker, Peter
author_facet Ansari, Rashid M.
Baker, Peter
author_sort Ansari, Rashid M.
collection PubMed
description BACKGROUND: The infection of Corona Virus Disease (Covid-19) is challenging health problems worldwide. COVID-19 pandemic is spreading all over the world with the number of infected cases increased to 54.4 million with 1.32 million deaths. Different types of statistical models have been developed to predict viral infection and multiple studies have compared the performance of these predictive models, but results were not consistent. This study aimed to develop and provide easy to use model to predict the Covid-19 infection severity in the patients and to help understanding the patient’s condition. METHODS: This study analyzed simulated data obtained from the large database for 340 patients with an active Covid-19 infection. The study identified predictors of Covid-19 outcomes that may be measured in two different ways: the total T-cell levels in the blood with T-cell subsets and number of cells in the blood infected with virus. All measures are relatively unobtrusive as they only require a blood sample, however there is a significant laboratory cost implications for measuring the number of cells infected with virus. This study used methodological approach using two different methods showing how multiple regression and logistic regression can be used in the context of Covid-19 longitudinal data to develop the prediction models. RESULTS: This study has identified the predictors of Covid-19 infection outcomes and developed prediction models. In the regression model of Total_T Cell, the predictors BMI, comorbidity and Total_Tcell were all associated with increased levels of infection severity (p < 0.001). For BMI, the mean % of unhealthy cells increased by 0.42 (95% CI 0.24 to 0.60) and comorbidity predictor has on average 8.3% more unhealthy liver cells than without comorbidity (95% CI — 2.9%–1.29%). The results of multivariate logistic regression model predicting the Covid-19 Infection severity were promising. The significant predictors were observed such as Age (OR 0.95, p = 0.02, 95% CI: 0.91–0.99), Helper T_cells (OR O.93, p = 0.03, 95% CI: 0.87–0.99), Basic_Tcell (OR 1.11, p = 0.001, 95% CI: 1.06–1.71) and Comorbidity (OR 0.41, p = 0.05, 95% CI: 0.16–1.07). CONCLUSIONS: In this study recommendation has been provided to clinical researchers on the best way to use the various Covid-19 infections measures along with identifying other possible predictors of Covid-19 infection. It is imperative to monitor closely the T-cell subsets using prediction models that might provide valuable information about the patient’s condition during the treatment process.
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spelling pubmed-79707942021-03-19 Identifying the predictors of Covid-19 infection outcomes and development of prediction models Ansari, Rashid M. Baker, Peter J Infect Public Health Article BACKGROUND: The infection of Corona Virus Disease (Covid-19) is challenging health problems worldwide. COVID-19 pandemic is spreading all over the world with the number of infected cases increased to 54.4 million with 1.32 million deaths. Different types of statistical models have been developed to predict viral infection and multiple studies have compared the performance of these predictive models, but results were not consistent. This study aimed to develop and provide easy to use model to predict the Covid-19 infection severity in the patients and to help understanding the patient’s condition. METHODS: This study analyzed simulated data obtained from the large database for 340 patients with an active Covid-19 infection. The study identified predictors of Covid-19 outcomes that may be measured in two different ways: the total T-cell levels in the blood with T-cell subsets and number of cells in the blood infected with virus. All measures are relatively unobtrusive as they only require a blood sample, however there is a significant laboratory cost implications for measuring the number of cells infected with virus. This study used methodological approach using two different methods showing how multiple regression and logistic regression can be used in the context of Covid-19 longitudinal data to develop the prediction models. RESULTS: This study has identified the predictors of Covid-19 infection outcomes and developed prediction models. In the regression model of Total_T Cell, the predictors BMI, comorbidity and Total_Tcell were all associated with increased levels of infection severity (p < 0.001). For BMI, the mean % of unhealthy cells increased by 0.42 (95% CI 0.24 to 0.60) and comorbidity predictor has on average 8.3% more unhealthy liver cells than without comorbidity (95% CI — 2.9%–1.29%). The results of multivariate logistic regression model predicting the Covid-19 Infection severity were promising. The significant predictors were observed such as Age (OR 0.95, p = 0.02, 95% CI: 0.91–0.99), Helper T_cells (OR O.93, p = 0.03, 95% CI: 0.87–0.99), Basic_Tcell (OR 1.11, p = 0.001, 95% CI: 1.06–1.71) and Comorbidity (OR 0.41, p = 0.05, 95% CI: 0.16–1.07). CONCLUSIONS: In this study recommendation has been provided to clinical researchers on the best way to use the various Covid-19 infections measures along with identifying other possible predictors of Covid-19 infection. It is imperative to monitor closely the T-cell subsets using prediction models that might provide valuable information about the patient’s condition during the treatment process. The Author(s). Published by Elsevier Ltd on behalf of King Saud Bin Abdulaziz University for Health Sciences. 2021-06 2021-03-18 /pmc/articles/PMC7970794/ /pubmed/34022732 http://dx.doi.org/10.1016/j.jiph.2021.03.006 Text en © 2021 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Ansari, Rashid M.
Baker, Peter
Identifying the predictors of Covid-19 infection outcomes and development of prediction models
title Identifying the predictors of Covid-19 infection outcomes and development of prediction models
title_full Identifying the predictors of Covid-19 infection outcomes and development of prediction models
title_fullStr Identifying the predictors of Covid-19 infection outcomes and development of prediction models
title_full_unstemmed Identifying the predictors of Covid-19 infection outcomes and development of prediction models
title_short Identifying the predictors of Covid-19 infection outcomes and development of prediction models
title_sort identifying the predictors of covid-19 infection outcomes and development of prediction models
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7970794/
https://www.ncbi.nlm.nih.gov/pubmed/34022732
http://dx.doi.org/10.1016/j.jiph.2021.03.006
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