The complete chloroplast genome of Tibetan medicinal plant Rubus phoenicolasius Maxim

Rubus phoenicolasius Maxim. is a traditional Tibetan medicine and widely used in the clinical pharmacology. In current study, the complete chloroplast genome of R. phoenicolasius was reported. The total length of the genome was 155,144 bp with the GC content of 37.9%. We predicted 130 genes in the g...

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Detalles Bibliográficos
Autores principales: Zhang, Guoying, Liu, Yarong, Hai, Ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971196/
https://www.ncbi.nlm.nih.gov/pubmed/33796668
http://dx.doi.org/10.1080/23802359.2021.1886013
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author Zhang, Guoying
Liu, Yarong
Hai, Ping
author_facet Zhang, Guoying
Liu, Yarong
Hai, Ping
author_sort Zhang, Guoying
collection PubMed
description Rubus phoenicolasius Maxim. is a traditional Tibetan medicine and widely used in the clinical pharmacology. In current study, the complete chloroplast genome of R. phoenicolasius was reported. The total length of the genome was 155,144 bp with the GC content of 37.9%. We predicted 130 genes in the genome including 84 protein-coding genes, 37 tRNA genes, 8 rRNA genes and 1 pseudogene. 17 genes were duplicated in the IR regions including 7 tRNA, 4 rRNA and 6 protein-coding genes. Phylogenomic analysis revealed that R. phoenicolasius forms a strong supported branch with R. amabilis and R. coreanus under the Rosaceae clade.
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spelling pubmed-79711962021-03-31 The complete chloroplast genome of Tibetan medicinal plant Rubus phoenicolasius Maxim Zhang, Guoying Liu, Yarong Hai, Ping Mitochondrial DNA B Resour Mitogenome Announcement Rubus phoenicolasius Maxim. is a traditional Tibetan medicine and widely used in the clinical pharmacology. In current study, the complete chloroplast genome of R. phoenicolasius was reported. The total length of the genome was 155,144 bp with the GC content of 37.9%. We predicted 130 genes in the genome including 84 protein-coding genes, 37 tRNA genes, 8 rRNA genes and 1 pseudogene. 17 genes were duplicated in the IR regions including 7 tRNA, 4 rRNA and 6 protein-coding genes. Phylogenomic analysis revealed that R. phoenicolasius forms a strong supported branch with R. amabilis and R. coreanus under the Rosaceae clade. Taylor & Francis 2021-03-15 /pmc/articles/PMC7971196/ /pubmed/33796668 http://dx.doi.org/10.1080/23802359.2021.1886013 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Guoying
Liu, Yarong
Hai, Ping
The complete chloroplast genome of Tibetan medicinal plant Rubus phoenicolasius Maxim
title The complete chloroplast genome of Tibetan medicinal plant Rubus phoenicolasius Maxim
title_full The complete chloroplast genome of Tibetan medicinal plant Rubus phoenicolasius Maxim
title_fullStr The complete chloroplast genome of Tibetan medicinal plant Rubus phoenicolasius Maxim
title_full_unstemmed The complete chloroplast genome of Tibetan medicinal plant Rubus phoenicolasius Maxim
title_short The complete chloroplast genome of Tibetan medicinal plant Rubus phoenicolasius Maxim
title_sort complete chloroplast genome of tibetan medicinal plant rubus phoenicolasius maxim
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971196/
https://www.ncbi.nlm.nih.gov/pubmed/33796668
http://dx.doi.org/10.1080/23802359.2021.1886013
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