Characterization of the complete chloroplast genome of a Chinese Endangered species Cymbidium mastersii

Cymbidium mastersii is an endangered species belonging to the first ranking in protection category in China with important ornamental value and breeding value. This study used Illumina high-throughput sequencing technologies for C. mastersii of chloroplast genome sequencing. The genome features of C...

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Detalles Bibliográficos
Autores principales: Ling, Qing, Cheng, Longjie, Li, Zhilin, Zhao, Yiran, Wang, Yuying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971198/
https://www.ncbi.nlm.nih.gov/pubmed/33796643
http://dx.doi.org/10.1080/23802359.2020.1851152
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author Ling, Qing
Cheng, Longjie
Li, Zhilin
Zhao, Yiran
Wang, Yuying
author_facet Ling, Qing
Cheng, Longjie
Li, Zhilin
Zhao, Yiran
Wang, Yuying
author_sort Ling, Qing
collection PubMed
description Cymbidium mastersii is an endangered species belonging to the first ranking in protection category in China with important ornamental value and breeding value. This study used Illumina high-throughput sequencing technologies for C. mastersii of chloroplast genome sequencing. The genome features of C. mastersii and the phylogenetic relationships were reported and established. The complete chloroplast genome is 156,317 bp in length, consisting of a pair of inverse duplication regions 26,544 bp, a large single-copy region 85,360 bp and a small single-copy region 17,869 bp. The entire genome contains 73 mRNA genes, 30 tRNA genes and 4 rRNA genes. The phylogenetic tree of 23 Orchidaceae species revealed C. mastersii is more closely related to Cymbidium eburneum.
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spelling pubmed-79711982021-03-31 Characterization of the complete chloroplast genome of a Chinese Endangered species Cymbidium mastersii Ling, Qing Cheng, Longjie Li, Zhilin Zhao, Yiran Wang, Yuying Mitochondrial DNA B Resour Mitogenome Announcement Cymbidium mastersii is an endangered species belonging to the first ranking in protection category in China with important ornamental value and breeding value. This study used Illumina high-throughput sequencing technologies for C. mastersii of chloroplast genome sequencing. The genome features of C. mastersii and the phylogenetic relationships were reported and established. The complete chloroplast genome is 156,317 bp in length, consisting of a pair of inverse duplication regions 26,544 bp, a large single-copy region 85,360 bp and a small single-copy region 17,869 bp. The entire genome contains 73 mRNA genes, 30 tRNA genes and 4 rRNA genes. The phylogenetic tree of 23 Orchidaceae species revealed C. mastersii is more closely related to Cymbidium eburneum. Taylor & Francis 2021-03-15 /pmc/articles/PMC7971198/ /pubmed/33796643 http://dx.doi.org/10.1080/23802359.2020.1851152 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ling, Qing
Cheng, Longjie
Li, Zhilin
Zhao, Yiran
Wang, Yuying
Characterization of the complete chloroplast genome of a Chinese Endangered species Cymbidium mastersii
title Characterization of the complete chloroplast genome of a Chinese Endangered species Cymbidium mastersii
title_full Characterization of the complete chloroplast genome of a Chinese Endangered species Cymbidium mastersii
title_fullStr Characterization of the complete chloroplast genome of a Chinese Endangered species Cymbidium mastersii
title_full_unstemmed Characterization of the complete chloroplast genome of a Chinese Endangered species Cymbidium mastersii
title_short Characterization of the complete chloroplast genome of a Chinese Endangered species Cymbidium mastersii
title_sort characterization of the complete chloroplast genome of a chinese endangered species cymbidium mastersii
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971198/
https://www.ncbi.nlm.nih.gov/pubmed/33796643
http://dx.doi.org/10.1080/23802359.2020.1851152
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