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The complete chloroplast genome of Abutilon theophrasti medic (Malvaceae)

Abutilon theophrasti Medic is a traditional Chinese medicine, which can be seen nearly everywhere in China. In order to study its complete chloroplast genome, we collected leaves and obtained chloroplast genome information through next-generation sequencing. It showed that the genome whole length is...

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Autores principales: Lv, Yanping, Yi, Yuqi, Han, Rongchun, Tong, Xiaohui, Takahashi, Hiroki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971203/
https://www.ncbi.nlm.nih.gov/pubmed/33796678
http://dx.doi.org/10.1080/23802359.2021.1886886
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author Lv, Yanping
Yi, Yuqi
Han, Rongchun
Tong, Xiaohui
Takahashi, Hiroki
author_facet Lv, Yanping
Yi, Yuqi
Han, Rongchun
Tong, Xiaohui
Takahashi, Hiroki
author_sort Lv, Yanping
collection PubMed
description Abutilon theophrasti Medic is a traditional Chinese medicine, which can be seen nearly everywhere in China. In order to study its complete chloroplast genome, we collected leaves and obtained chloroplast genome information through next-generation sequencing. It showed that the genome whole length is 160,331 bp, resulted from 24,578,194 raw reads with 3,669,530,829 bases in total, and the GC contents ratio is 36.90%. Besides, the large single-copy region (LSC) is 89,006 bp, the small single-copy region (SSC) 20,149 bp, and inverted repeat (IR) 25,588 bp. The chloroplast genome encodes 76 genes, which contains 38 protein genes, five rRNA genes, and 33 tRNA. By conducting phylogenetic analysis for A.theophrasti, plants from genus Gossypium demonstrated close relationship with it.
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spelling pubmed-79712032021-03-31 The complete chloroplast genome of Abutilon theophrasti medic (Malvaceae) Lv, Yanping Yi, Yuqi Han, Rongchun Tong, Xiaohui Takahashi, Hiroki Mitochondrial DNA B Resour Mitogenome Announcement Abutilon theophrasti Medic is a traditional Chinese medicine, which can be seen nearly everywhere in China. In order to study its complete chloroplast genome, we collected leaves and obtained chloroplast genome information through next-generation sequencing. It showed that the genome whole length is 160,331 bp, resulted from 24,578,194 raw reads with 3,669,530,829 bases in total, and the GC contents ratio is 36.90%. Besides, the large single-copy region (LSC) is 89,006 bp, the small single-copy region (SSC) 20,149 bp, and inverted repeat (IR) 25,588 bp. The chloroplast genome encodes 76 genes, which contains 38 protein genes, five rRNA genes, and 33 tRNA. By conducting phylogenetic analysis for A.theophrasti, plants from genus Gossypium demonstrated close relationship with it. Taylor & Francis 2021-03-16 /pmc/articles/PMC7971203/ /pubmed/33796678 http://dx.doi.org/10.1080/23802359.2021.1886886 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lv, Yanping
Yi, Yuqi
Han, Rongchun
Tong, Xiaohui
Takahashi, Hiroki
The complete chloroplast genome of Abutilon theophrasti medic (Malvaceae)
title The complete chloroplast genome of Abutilon theophrasti medic (Malvaceae)
title_full The complete chloroplast genome of Abutilon theophrasti medic (Malvaceae)
title_fullStr The complete chloroplast genome of Abutilon theophrasti medic (Malvaceae)
title_full_unstemmed The complete chloroplast genome of Abutilon theophrasti medic (Malvaceae)
title_short The complete chloroplast genome of Abutilon theophrasti medic (Malvaceae)
title_sort complete chloroplast genome of abutilon theophrasti medic (malvaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971203/
https://www.ncbi.nlm.nih.gov/pubmed/33796678
http://dx.doi.org/10.1080/23802359.2021.1886886
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