The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China

Lilium amoenum E. H. Wilson ex Sealy is classified in Liliaceae, and it is an important ornamental plant with wonderful rose-red color and pleasant rose fragrance. In this study, we sequenced the complete chloroplast genome of L. amoenum by Illumina Hiseq X Ten and PacBio RS technologies. The genome...

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Autores principales: Bai, Weiwei, Wu, Jingzhi, He, Shuilian, Gu, Zhijia, Jiang, Hui, Wu, Hongzhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971213/
https://www.ncbi.nlm.nih.gov/pubmed/33796656
http://dx.doi.org/10.1080/23802359.2021.1885318
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author Bai, Weiwei
Wu, Jingzhi
He, Shuilian
Gu, Zhijia
Jiang, Hui
Wu, Hongzhi
author_facet Bai, Weiwei
Wu, Jingzhi
He, Shuilian
Gu, Zhijia
Jiang, Hui
Wu, Hongzhi
author_sort Bai, Weiwei
collection PubMed
description Lilium amoenum E. H. Wilson ex Sealy is classified in Liliaceae, and it is an important ornamental plant with wonderful rose-red color and pleasant rose fragrance. In this study, we sequenced the complete chloroplast genome of L. amoenum by Illumina Hiseq X Ten and PacBio RS technologies. The genome size of L. amoenum is 152,280 bp, and displays a typical quadripartite structure: one large single-copy (LSC, 81,977 bp), one small single-copy (SSC, 17,539 bp), and a pair of inverted repeat regions (IRs, 26,382 bp). The overall GC content was 37.0%. The complete genome contained 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that L. amoenum is closely related to L. taliense and L. bakerianum. The present study could afford crucial genetic information for further researches on the genus and related genera.
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spelling pubmed-79712132021-03-31 The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China Bai, Weiwei Wu, Jingzhi He, Shuilian Gu, Zhijia Jiang, Hui Wu, Hongzhi Mitochondrial DNA B Resour Mitogenome Announcement Lilium amoenum E. H. Wilson ex Sealy is classified in Liliaceae, and it is an important ornamental plant with wonderful rose-red color and pleasant rose fragrance. In this study, we sequenced the complete chloroplast genome of L. amoenum by Illumina Hiseq X Ten and PacBio RS technologies. The genome size of L. amoenum is 152,280 bp, and displays a typical quadripartite structure: one large single-copy (LSC, 81,977 bp), one small single-copy (SSC, 17,539 bp), and a pair of inverted repeat regions (IRs, 26,382 bp). The overall GC content was 37.0%. The complete genome contained 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that L. amoenum is closely related to L. taliense and L. bakerianum. The present study could afford crucial genetic information for further researches on the genus and related genera. Taylor & Francis 2021-03-15 /pmc/articles/PMC7971213/ /pubmed/33796656 http://dx.doi.org/10.1080/23802359.2021.1885318 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Bai, Weiwei
Wu, Jingzhi
He, Shuilian
Gu, Zhijia
Jiang, Hui
Wu, Hongzhi
The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China
title The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China
title_full The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China
title_fullStr The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China
title_full_unstemmed The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China
title_short The complete chloroplast genome of Lilium amoenum (Liliopsida: Liliaceae) from Yunnan, China
title_sort complete chloroplast genome of lilium amoenum (liliopsida: liliaceae) from yunnan, china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971213/
https://www.ncbi.nlm.nih.gov/pubmed/33796656
http://dx.doi.org/10.1080/23802359.2021.1885318
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