The complete chloroplast genome of wild Magnolia officinalis Rehd. et Wils

Magnolia officinalis Rehd. et Wils. is an important traditional Chinese herbal medicine and widely distributed in the south of Yangtze River in China. In this study, the complete chloroplast genome sequence of wild M. officinalis was assembled and characterized from high-throughput sequencing data....

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Autores principales: Yi, Shanyong, Song, Xiangwen, Yu, Wangyang, Wang, Wei, Xu, Tao, Zhang, Rongfei, Liu, Dong, Han, Bangxing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971295/
https://www.ncbi.nlm.nih.gov/pubmed/33796666
http://dx.doi.org/10.1080/23802359.2021.1886011
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author Yi, Shanyong
Song, Xiangwen
Yu, Wangyang
Wang, Wei
Xu, Tao
Zhang, Rongfei
Liu, Dong
Han, Bangxing
author_facet Yi, Shanyong
Song, Xiangwen
Yu, Wangyang
Wang, Wei
Xu, Tao
Zhang, Rongfei
Liu, Dong
Han, Bangxing
author_sort Yi, Shanyong
collection PubMed
description Magnolia officinalis Rehd. et Wils. is an important traditional Chinese herbal medicine and widely distributed in the south of Yangtze River in China. In this study, the complete chloroplast genome sequence of wild M. officinalis was assembled and characterized from high-throughput sequencing data. The chloroplast genome was 160,009 bp in length, consisting of large single-copy (LSC) and small single-copy (SSC) regions of 88,134 bp and 18,739 bp, respectively, which were separated by a pair of 26,568 bp inverted repeat (IR) regions. The genome is predicted to contain 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 39.3%. A phylogenetic tree reconstructed by 86 chloroplast genomes reveals that M. officinalis is mostly related to cultivated M. officinalis, M. obovata and M. tripetala.
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spelling pubmed-79712952021-03-31 The complete chloroplast genome of wild Magnolia officinalis Rehd. et Wils Yi, Shanyong Song, Xiangwen Yu, Wangyang Wang, Wei Xu, Tao Zhang, Rongfei Liu, Dong Han, Bangxing Mitochondrial DNA B Resour Mitogenome Announcement Magnolia officinalis Rehd. et Wils. is an important traditional Chinese herbal medicine and widely distributed in the south of Yangtze River in China. In this study, the complete chloroplast genome sequence of wild M. officinalis was assembled and characterized from high-throughput sequencing data. The chloroplast genome was 160,009 bp in length, consisting of large single-copy (LSC) and small single-copy (SSC) regions of 88,134 bp and 18,739 bp, respectively, which were separated by a pair of 26,568 bp inverted repeat (IR) regions. The genome is predicted to contain 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 39.3%. A phylogenetic tree reconstructed by 86 chloroplast genomes reveals that M. officinalis is mostly related to cultivated M. officinalis, M. obovata and M. tripetala. Taylor & Francis 2021-03-15 /pmc/articles/PMC7971295/ /pubmed/33796666 http://dx.doi.org/10.1080/23802359.2021.1886011 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yi, Shanyong
Song, Xiangwen
Yu, Wangyang
Wang, Wei
Xu, Tao
Zhang, Rongfei
Liu, Dong
Han, Bangxing
The complete chloroplast genome of wild Magnolia officinalis Rehd. et Wils
title The complete chloroplast genome of wild Magnolia officinalis Rehd. et Wils
title_full The complete chloroplast genome of wild Magnolia officinalis Rehd. et Wils
title_fullStr The complete chloroplast genome of wild Magnolia officinalis Rehd. et Wils
title_full_unstemmed The complete chloroplast genome of wild Magnolia officinalis Rehd. et Wils
title_short The complete chloroplast genome of wild Magnolia officinalis Rehd. et Wils
title_sort complete chloroplast genome of wild magnolia officinalis rehd. et wils
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7971295/
https://www.ncbi.nlm.nih.gov/pubmed/33796666
http://dx.doi.org/10.1080/23802359.2021.1886011
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