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Transfer learning–based ensemble support vector machine model for automated COVID-19 detection using lung computerized tomography scan data

The novel discovered disease coronavirus popularly known as COVID-19 is caused due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and declared a pandemic by the World Health Organization (WHO). An early-stage detection of COVID-19 is crucial for the containment of the pandemic it ha...

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Autores principales: Singh, Mukul, Bansal, Shrey, Ahuja, Sakshi, Dubey, Rahul Kumar, Panigrahi, Bijaya Ketan, Dey, Nilanjan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7972022/
https://www.ncbi.nlm.nih.gov/pubmed/33738639
http://dx.doi.org/10.1007/s11517-020-02299-2
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author Singh, Mukul
Bansal, Shrey
Ahuja, Sakshi
Dubey, Rahul Kumar
Panigrahi, Bijaya Ketan
Dey, Nilanjan
author_facet Singh, Mukul
Bansal, Shrey
Ahuja, Sakshi
Dubey, Rahul Kumar
Panigrahi, Bijaya Ketan
Dey, Nilanjan
author_sort Singh, Mukul
collection PubMed
description The novel discovered disease coronavirus popularly known as COVID-19 is caused due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and declared a pandemic by the World Health Organization (WHO). An early-stage detection of COVID-19 is crucial for the containment of the pandemic it has caused. In this study, a transfer learning–based COVID-19 screening technique is proposed. The motivation of this study is to design an automated system that can assist medical staff especially in areas where trained staff are outnumbered. The study investigates the potential of transfer learning–based models for automatically diagnosing diseases like COVID-19 to assist the medical force, especially in times of an outbreak. In the proposed work, a deep learning model, i.e., truncated VGG16 (Visual Geometry Group from Oxford) is implemented to screen COVID-19 CT scans. The VGG16 architecture is fine-tuned and used to extract features from CT scan images. Further principal component analysis (PCA) is used for feature selection. For the final classification, four different classifiers, namely deep convolutional neural network (DCNN), extreme learning machine (ELM), online sequential ELM, and bagging ensemble with support vector machine (SVM) are compared. The best performing classifier bagging ensemble with SVM within 385 ms achieved an accuracy of 95.7%, the precision of 95.8%, area under curve (AUC) of 0.958, and an F1 score of 95.3% on 208 test images. The results obtained on diverse datasets prove the superiority and robustness of the proposed work. A pre-processing technique has also been proposed for radiological data. The study further compares pre-trained CNN architectures and classification models against the proposed technique. [Image: see text]
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spelling pubmed-79720222021-03-19 Transfer learning–based ensemble support vector machine model for automated COVID-19 detection using lung computerized tomography scan data Singh, Mukul Bansal, Shrey Ahuja, Sakshi Dubey, Rahul Kumar Panigrahi, Bijaya Ketan Dey, Nilanjan Med Biol Eng Comput Original Article The novel discovered disease coronavirus popularly known as COVID-19 is caused due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and declared a pandemic by the World Health Organization (WHO). An early-stage detection of COVID-19 is crucial for the containment of the pandemic it has caused. In this study, a transfer learning–based COVID-19 screening technique is proposed. The motivation of this study is to design an automated system that can assist medical staff especially in areas where trained staff are outnumbered. The study investigates the potential of transfer learning–based models for automatically diagnosing diseases like COVID-19 to assist the medical force, especially in times of an outbreak. In the proposed work, a deep learning model, i.e., truncated VGG16 (Visual Geometry Group from Oxford) is implemented to screen COVID-19 CT scans. The VGG16 architecture is fine-tuned and used to extract features from CT scan images. Further principal component analysis (PCA) is used for feature selection. For the final classification, four different classifiers, namely deep convolutional neural network (DCNN), extreme learning machine (ELM), online sequential ELM, and bagging ensemble with support vector machine (SVM) are compared. The best performing classifier bagging ensemble with SVM within 385 ms achieved an accuracy of 95.7%, the precision of 95.8%, area under curve (AUC) of 0.958, and an F1 score of 95.3% on 208 test images. The results obtained on diverse datasets prove the superiority and robustness of the proposed work. A pre-processing technique has also been proposed for radiological data. The study further compares pre-trained CNN architectures and classification models against the proposed technique. [Image: see text] Springer Berlin Heidelberg 2021-03-18 2021 /pmc/articles/PMC7972022/ /pubmed/33738639 http://dx.doi.org/10.1007/s11517-020-02299-2 Text en © International Federation for Medical and Biological Engineering 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Singh, Mukul
Bansal, Shrey
Ahuja, Sakshi
Dubey, Rahul Kumar
Panigrahi, Bijaya Ketan
Dey, Nilanjan
Transfer learning–based ensemble support vector machine model for automated COVID-19 detection using lung computerized tomography scan data
title Transfer learning–based ensemble support vector machine model for automated COVID-19 detection using lung computerized tomography scan data
title_full Transfer learning–based ensemble support vector machine model for automated COVID-19 detection using lung computerized tomography scan data
title_fullStr Transfer learning–based ensemble support vector machine model for automated COVID-19 detection using lung computerized tomography scan data
title_full_unstemmed Transfer learning–based ensemble support vector machine model for automated COVID-19 detection using lung computerized tomography scan data
title_short Transfer learning–based ensemble support vector machine model for automated COVID-19 detection using lung computerized tomography scan data
title_sort transfer learning–based ensemble support vector machine model for automated covid-19 detection using lung computerized tomography scan data
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7972022/
https://www.ncbi.nlm.nih.gov/pubmed/33738639
http://dx.doi.org/10.1007/s11517-020-02299-2
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