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Photoacoustic microscopy with sparse data by convolutional neural networks

The point-by-point scanning mechanism of photoacoustic microscopy (PAM) results in low-speed imaging, limiting the application of PAM. In this work, we propose a method to improve the quality of sparse PAM images using convolutional neural networks (CNNs), thereby speeding up image acquisition while...

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Detalles Bibliográficos
Autores principales: Zhou, Jiasheng, He, Da, Shang, Xiaoyu, Guo, Zhendong, Chen, Sung-Liang, Luo, Jiajia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7973247/
https://www.ncbi.nlm.nih.gov/pubmed/33763327
http://dx.doi.org/10.1016/j.pacs.2021.100242
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author Zhou, Jiasheng
He, Da
Shang, Xiaoyu
Guo, Zhendong
Chen, Sung-Liang
Luo, Jiajia
author_facet Zhou, Jiasheng
He, Da
Shang, Xiaoyu
Guo, Zhendong
Chen, Sung-Liang
Luo, Jiajia
author_sort Zhou, Jiasheng
collection PubMed
description The point-by-point scanning mechanism of photoacoustic microscopy (PAM) results in low-speed imaging, limiting the application of PAM. In this work, we propose a method to improve the quality of sparse PAM images using convolutional neural networks (CNNs), thereby speeding up image acquisition while maintaining good image quality. The CNN model utilizes attention modules, residual blocks, and perceptual losses to reconstruct the sparse PAM image, which is a mapping from a 1/4 or 1/16 low-sampling sparse PAM image to a latent fully-sampled one. The model is trained and validated mainly on PAM images of leaf veins, showing effective improvements quantitatively and qualitatively. Our model is also tested using in vivo PAM images of blood vessels of mouse ears and eyes. The results suggest that the model can enhance the quality of the sparse PAM image of blood vessels in several aspects, which facilitates fast PAM and its clinical applications.
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spelling pubmed-79732472021-03-23 Photoacoustic microscopy with sparse data by convolutional neural networks Zhou, Jiasheng He, Da Shang, Xiaoyu Guo, Zhendong Chen, Sung-Liang Luo, Jiajia Photoacoustics Research Article The point-by-point scanning mechanism of photoacoustic microscopy (PAM) results in low-speed imaging, limiting the application of PAM. In this work, we propose a method to improve the quality of sparse PAM images using convolutional neural networks (CNNs), thereby speeding up image acquisition while maintaining good image quality. The CNN model utilizes attention modules, residual blocks, and perceptual losses to reconstruct the sparse PAM image, which is a mapping from a 1/4 or 1/16 low-sampling sparse PAM image to a latent fully-sampled one. The model is trained and validated mainly on PAM images of leaf veins, showing effective improvements quantitatively and qualitatively. Our model is also tested using in vivo PAM images of blood vessels of mouse ears and eyes. The results suggest that the model can enhance the quality of the sparse PAM image of blood vessels in several aspects, which facilitates fast PAM and its clinical applications. Elsevier 2021-02-02 /pmc/articles/PMC7973247/ /pubmed/33763327 http://dx.doi.org/10.1016/j.pacs.2021.100242 Text en © 2021 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Zhou, Jiasheng
He, Da
Shang, Xiaoyu
Guo, Zhendong
Chen, Sung-Liang
Luo, Jiajia
Photoacoustic microscopy with sparse data by convolutional neural networks
title Photoacoustic microscopy with sparse data by convolutional neural networks
title_full Photoacoustic microscopy with sparse data by convolutional neural networks
title_fullStr Photoacoustic microscopy with sparse data by convolutional neural networks
title_full_unstemmed Photoacoustic microscopy with sparse data by convolutional neural networks
title_short Photoacoustic microscopy with sparse data by convolutional neural networks
title_sort photoacoustic microscopy with sparse data by convolutional neural networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7973247/
https://www.ncbi.nlm.nih.gov/pubmed/33763327
http://dx.doi.org/10.1016/j.pacs.2021.100242
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