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Photoacoustic microscopy with sparse data by convolutional neural networks
The point-by-point scanning mechanism of photoacoustic microscopy (PAM) results in low-speed imaging, limiting the application of PAM. In this work, we propose a method to improve the quality of sparse PAM images using convolutional neural networks (CNNs), thereby speeding up image acquisition while...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7973247/ https://www.ncbi.nlm.nih.gov/pubmed/33763327 http://dx.doi.org/10.1016/j.pacs.2021.100242 |
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author | Zhou, Jiasheng He, Da Shang, Xiaoyu Guo, Zhendong Chen, Sung-Liang Luo, Jiajia |
author_facet | Zhou, Jiasheng He, Da Shang, Xiaoyu Guo, Zhendong Chen, Sung-Liang Luo, Jiajia |
author_sort | Zhou, Jiasheng |
collection | PubMed |
description | The point-by-point scanning mechanism of photoacoustic microscopy (PAM) results in low-speed imaging, limiting the application of PAM. In this work, we propose a method to improve the quality of sparse PAM images using convolutional neural networks (CNNs), thereby speeding up image acquisition while maintaining good image quality. The CNN model utilizes attention modules, residual blocks, and perceptual losses to reconstruct the sparse PAM image, which is a mapping from a 1/4 or 1/16 low-sampling sparse PAM image to a latent fully-sampled one. The model is trained and validated mainly on PAM images of leaf veins, showing effective improvements quantitatively and qualitatively. Our model is also tested using in vivo PAM images of blood vessels of mouse ears and eyes. The results suggest that the model can enhance the quality of the sparse PAM image of blood vessels in several aspects, which facilitates fast PAM and its clinical applications. |
format | Online Article Text |
id | pubmed-7973247 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-79732472021-03-23 Photoacoustic microscopy with sparse data by convolutional neural networks Zhou, Jiasheng He, Da Shang, Xiaoyu Guo, Zhendong Chen, Sung-Liang Luo, Jiajia Photoacoustics Research Article The point-by-point scanning mechanism of photoacoustic microscopy (PAM) results in low-speed imaging, limiting the application of PAM. In this work, we propose a method to improve the quality of sparse PAM images using convolutional neural networks (CNNs), thereby speeding up image acquisition while maintaining good image quality. The CNN model utilizes attention modules, residual blocks, and perceptual losses to reconstruct the sparse PAM image, which is a mapping from a 1/4 or 1/16 low-sampling sparse PAM image to a latent fully-sampled one. The model is trained and validated mainly on PAM images of leaf veins, showing effective improvements quantitatively and qualitatively. Our model is also tested using in vivo PAM images of blood vessels of mouse ears and eyes. The results suggest that the model can enhance the quality of the sparse PAM image of blood vessels in several aspects, which facilitates fast PAM and its clinical applications. Elsevier 2021-02-02 /pmc/articles/PMC7973247/ /pubmed/33763327 http://dx.doi.org/10.1016/j.pacs.2021.100242 Text en © 2021 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Zhou, Jiasheng He, Da Shang, Xiaoyu Guo, Zhendong Chen, Sung-Liang Luo, Jiajia Photoacoustic microscopy with sparse data by convolutional neural networks |
title | Photoacoustic microscopy with sparse data by convolutional neural networks |
title_full | Photoacoustic microscopy with sparse data by convolutional neural networks |
title_fullStr | Photoacoustic microscopy with sparse data by convolutional neural networks |
title_full_unstemmed | Photoacoustic microscopy with sparse data by convolutional neural networks |
title_short | Photoacoustic microscopy with sparse data by convolutional neural networks |
title_sort | photoacoustic microscopy with sparse data by convolutional neural networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7973247/ https://www.ncbi.nlm.nih.gov/pubmed/33763327 http://dx.doi.org/10.1016/j.pacs.2021.100242 |
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