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Backbone and nearly complete side-chain chemical shift assignments of the human death-associated protein 1 (DAP1)

Death-associated protein 1 (DAP1) is a proline-rich cytoplasmatic protein highly conserved in most eukaryotes. It has been reported to be involved in controlling cell growth and migration, autophagy and apoptosis. The presence of human DAP1 is associated to a favourable prognosis in different types...

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Autores principales: Wiedemann, Christoph, Voigt, Johanna, Jirschitzka, Jan, Häfner, Sabine, Ohlenschläger, Oliver, Bordusa, Frank
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7973646/
https://www.ncbi.nlm.nih.gov/pubmed/33263927
http://dx.doi.org/10.1007/s12104-020-09988-x
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author Wiedemann, Christoph
Voigt, Johanna
Jirschitzka, Jan
Häfner, Sabine
Ohlenschläger, Oliver
Bordusa, Frank
author_facet Wiedemann, Christoph
Voigt, Johanna
Jirschitzka, Jan
Häfner, Sabine
Ohlenschläger, Oliver
Bordusa, Frank
author_sort Wiedemann, Christoph
collection PubMed
description Death-associated protein 1 (DAP1) is a proline-rich cytoplasmatic protein highly conserved in most eukaryotes. It has been reported to be involved in controlling cell growth and migration, autophagy and apoptosis. The presence of human DAP1 is associated to a favourable prognosis in different types of cancer. Here we describe the almost complete [Formula: see text] , [Formula: see text] , and [Formula: see text] chemical shift assignments of the human DAP1. The limited spectral dispersion, mainly in the [Formula: see text] region, and the lack of defined secondary structure elements, predicted based on chemical shifts, identifies human DAP1 as an intrinsically disordered protein (IDP). This work lays the foundation for further structural investigations, dynamic studies, mapping of potential interaction partners or drug screening and development.
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spelling pubmed-79736462021-04-05 Backbone and nearly complete side-chain chemical shift assignments of the human death-associated protein 1 (DAP1) Wiedemann, Christoph Voigt, Johanna Jirschitzka, Jan Häfner, Sabine Ohlenschläger, Oliver Bordusa, Frank Biomol NMR Assign Article Death-associated protein 1 (DAP1) is a proline-rich cytoplasmatic protein highly conserved in most eukaryotes. It has been reported to be involved in controlling cell growth and migration, autophagy and apoptosis. The presence of human DAP1 is associated to a favourable prognosis in different types of cancer. Here we describe the almost complete [Formula: see text] , [Formula: see text] , and [Formula: see text] chemical shift assignments of the human DAP1. The limited spectral dispersion, mainly in the [Formula: see text] region, and the lack of defined secondary structure elements, predicted based on chemical shifts, identifies human DAP1 as an intrinsically disordered protein (IDP). This work lays the foundation for further structural investigations, dynamic studies, mapping of potential interaction partners or drug screening and development. Springer Netherlands 2020-12-02 2021 /pmc/articles/PMC7973646/ /pubmed/33263927 http://dx.doi.org/10.1007/s12104-020-09988-x Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Wiedemann, Christoph
Voigt, Johanna
Jirschitzka, Jan
Häfner, Sabine
Ohlenschläger, Oliver
Bordusa, Frank
Backbone and nearly complete side-chain chemical shift assignments of the human death-associated protein 1 (DAP1)
title Backbone and nearly complete side-chain chemical shift assignments of the human death-associated protein 1 (DAP1)
title_full Backbone and nearly complete side-chain chemical shift assignments of the human death-associated protein 1 (DAP1)
title_fullStr Backbone and nearly complete side-chain chemical shift assignments of the human death-associated protein 1 (DAP1)
title_full_unstemmed Backbone and nearly complete side-chain chemical shift assignments of the human death-associated protein 1 (DAP1)
title_short Backbone and nearly complete side-chain chemical shift assignments of the human death-associated protein 1 (DAP1)
title_sort backbone and nearly complete side-chain chemical shift assignments of the human death-associated protein 1 (dap1)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7973646/
https://www.ncbi.nlm.nih.gov/pubmed/33263927
http://dx.doi.org/10.1007/s12104-020-09988-x
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