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Differential microRNAs expression profiles in liver from three different lifestyle modification mice models
BACKGROUND: MicroRNAs play an important role in many fundamental biological and pathological processes. Defining the microRNAs profile underlying the processes by beneficial and detrimental lifestyles, including caloric restriction (CR), exercise and high-fat diet (HF), is necessary for understandin...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7977600/ https://www.ncbi.nlm.nih.gov/pubmed/33740891 http://dx.doi.org/10.1186/s12864-021-07507-3 |
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author | Gong, Huan Zhang, Ming Han, Yiwen Zhang, Ying Pang, Jing Zhao, Yanyang Chen, Beidong Wu, Wei Qi, Ruomei Zhang, Tiemei |
author_facet | Gong, Huan Zhang, Ming Han, Yiwen Zhang, Ying Pang, Jing Zhao, Yanyang Chen, Beidong Wu, Wei Qi, Ruomei Zhang, Tiemei |
author_sort | Gong, Huan |
collection | PubMed |
description | BACKGROUND: MicroRNAs play an important role in many fundamental biological and pathological processes. Defining the microRNAs profile underlying the processes by beneficial and detrimental lifestyles, including caloric restriction (CR), exercise and high-fat diet (HF), is necessary for understanding both normal physiology and the pathogenesis of metabolic disease. We used the microarray to detect microRNAs expression in livers from CR, EX and HF mice models. After predicted potential target genes of differentially expressed microRNAs with four algorithms, we applied GO and KEGG to analyze the function of predicted microRNA targets. RESULTS: We describe the overall microRNAs expression pattern, and identified 84 differentially expressed microRNAs changed by one or two or even all the three lifestyle modifications. The common and different enriched categories of gene function and main biochemical and signal transduction pathways were presented. CONCLUSIONS: We provided for the first time a comprehensive and thorough comparison of microRNAs expression profiles in liver among these lifestyle modifications. With this knowledge, our findings provide us with an overall vision of microRNAs in the molecular impact of lifestyle on health as well as useful clues for future and thorough research of the role of microRNAs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-021-07507-3. |
format | Online Article Text |
id | pubmed-7977600 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-79776002021-03-22 Differential microRNAs expression profiles in liver from three different lifestyle modification mice models Gong, Huan Zhang, Ming Han, Yiwen Zhang, Ying Pang, Jing Zhao, Yanyang Chen, Beidong Wu, Wei Qi, Ruomei Zhang, Tiemei BMC Genomics Research Article BACKGROUND: MicroRNAs play an important role in many fundamental biological and pathological processes. Defining the microRNAs profile underlying the processes by beneficial and detrimental lifestyles, including caloric restriction (CR), exercise and high-fat diet (HF), is necessary for understanding both normal physiology and the pathogenesis of metabolic disease. We used the microarray to detect microRNAs expression in livers from CR, EX and HF mice models. After predicted potential target genes of differentially expressed microRNAs with four algorithms, we applied GO and KEGG to analyze the function of predicted microRNA targets. RESULTS: We describe the overall microRNAs expression pattern, and identified 84 differentially expressed microRNAs changed by one or two or even all the three lifestyle modifications. The common and different enriched categories of gene function and main biochemical and signal transduction pathways were presented. CONCLUSIONS: We provided for the first time a comprehensive and thorough comparison of microRNAs expression profiles in liver among these lifestyle modifications. With this knowledge, our findings provide us with an overall vision of microRNAs in the molecular impact of lifestyle on health as well as useful clues for future and thorough research of the role of microRNAs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-021-07507-3. BioMed Central 2021-03-19 /pmc/articles/PMC7977600/ /pubmed/33740891 http://dx.doi.org/10.1186/s12864-021-07507-3 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Gong, Huan Zhang, Ming Han, Yiwen Zhang, Ying Pang, Jing Zhao, Yanyang Chen, Beidong Wu, Wei Qi, Ruomei Zhang, Tiemei Differential microRNAs expression profiles in liver from three different lifestyle modification mice models |
title | Differential microRNAs expression profiles in liver from three different lifestyle modification mice models |
title_full | Differential microRNAs expression profiles in liver from three different lifestyle modification mice models |
title_fullStr | Differential microRNAs expression profiles in liver from three different lifestyle modification mice models |
title_full_unstemmed | Differential microRNAs expression profiles in liver from three different lifestyle modification mice models |
title_short | Differential microRNAs expression profiles in liver from three different lifestyle modification mice models |
title_sort | differential micrornas expression profiles in liver from three different lifestyle modification mice models |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7977600/ https://www.ncbi.nlm.nih.gov/pubmed/33740891 http://dx.doi.org/10.1186/s12864-021-07507-3 |
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