Cargando…

Differential microRNAs expression profiles in liver from three different lifestyle modification mice models

BACKGROUND: MicroRNAs play an important role in many fundamental biological and pathological processes. Defining the microRNAs profile underlying the processes by beneficial and detrimental lifestyles, including caloric restriction (CR), exercise and high-fat diet (HF), is necessary for understandin...

Descripción completa

Detalles Bibliográficos
Autores principales: Gong, Huan, Zhang, Ming, Han, Yiwen, Zhang, Ying, Pang, Jing, Zhao, Yanyang, Chen, Beidong, Wu, Wei, Qi, Ruomei, Zhang, Tiemei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7977600/
https://www.ncbi.nlm.nih.gov/pubmed/33740891
http://dx.doi.org/10.1186/s12864-021-07507-3
_version_ 1783667136350126080
author Gong, Huan
Zhang, Ming
Han, Yiwen
Zhang, Ying
Pang, Jing
Zhao, Yanyang
Chen, Beidong
Wu, Wei
Qi, Ruomei
Zhang, Tiemei
author_facet Gong, Huan
Zhang, Ming
Han, Yiwen
Zhang, Ying
Pang, Jing
Zhao, Yanyang
Chen, Beidong
Wu, Wei
Qi, Ruomei
Zhang, Tiemei
author_sort Gong, Huan
collection PubMed
description BACKGROUND: MicroRNAs play an important role in many fundamental biological and pathological processes. Defining the microRNAs profile underlying the processes by beneficial and detrimental lifestyles, including caloric restriction (CR), exercise and high-fat diet (HF), is necessary for understanding both normal physiology and the pathogenesis of metabolic disease. We used the microarray to detect microRNAs expression in livers from CR, EX and HF mice models. After predicted potential target genes of differentially expressed microRNAs with four algorithms, we applied GO and KEGG to analyze the function of predicted microRNA targets. RESULTS: We describe the overall microRNAs expression pattern, and identified 84 differentially expressed microRNAs changed by one or two or even all the three lifestyle modifications. The common and different enriched categories of gene function and main biochemical and signal transduction pathways were presented. CONCLUSIONS: We provided for the first time a comprehensive and thorough comparison of microRNAs expression profiles in liver among these lifestyle modifications. With this knowledge, our findings provide us with an overall vision of microRNAs in the molecular impact of lifestyle on health as well as useful clues for future and thorough research of the role of microRNAs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-021-07507-3.
format Online
Article
Text
id pubmed-7977600
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-79776002021-03-22 Differential microRNAs expression profiles in liver from three different lifestyle modification mice models Gong, Huan Zhang, Ming Han, Yiwen Zhang, Ying Pang, Jing Zhao, Yanyang Chen, Beidong Wu, Wei Qi, Ruomei Zhang, Tiemei BMC Genomics Research Article BACKGROUND: MicroRNAs play an important role in many fundamental biological and pathological processes. Defining the microRNAs profile underlying the processes by beneficial and detrimental lifestyles, including caloric restriction (CR), exercise and high-fat diet (HF), is necessary for understanding both normal physiology and the pathogenesis of metabolic disease. We used the microarray to detect microRNAs expression in livers from CR, EX and HF mice models. After predicted potential target genes of differentially expressed microRNAs with four algorithms, we applied GO and KEGG to analyze the function of predicted microRNA targets. RESULTS: We describe the overall microRNAs expression pattern, and identified 84 differentially expressed microRNAs changed by one or two or even all the three lifestyle modifications. The common and different enriched categories of gene function and main biochemical and signal transduction pathways were presented. CONCLUSIONS: We provided for the first time a comprehensive and thorough comparison of microRNAs expression profiles in liver among these lifestyle modifications. With this knowledge, our findings provide us with an overall vision of microRNAs in the molecular impact of lifestyle on health as well as useful clues for future and thorough research of the role of microRNAs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-021-07507-3. BioMed Central 2021-03-19 /pmc/articles/PMC7977600/ /pubmed/33740891 http://dx.doi.org/10.1186/s12864-021-07507-3 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Gong, Huan
Zhang, Ming
Han, Yiwen
Zhang, Ying
Pang, Jing
Zhao, Yanyang
Chen, Beidong
Wu, Wei
Qi, Ruomei
Zhang, Tiemei
Differential microRNAs expression profiles in liver from three different lifestyle modification mice models
title Differential microRNAs expression profiles in liver from three different lifestyle modification mice models
title_full Differential microRNAs expression profiles in liver from three different lifestyle modification mice models
title_fullStr Differential microRNAs expression profiles in liver from three different lifestyle modification mice models
title_full_unstemmed Differential microRNAs expression profiles in liver from three different lifestyle modification mice models
title_short Differential microRNAs expression profiles in liver from three different lifestyle modification mice models
title_sort differential micrornas expression profiles in liver from three different lifestyle modification mice models
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7977600/
https://www.ncbi.nlm.nih.gov/pubmed/33740891
http://dx.doi.org/10.1186/s12864-021-07507-3
work_keys_str_mv AT gonghuan differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels
AT zhangming differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels
AT hanyiwen differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels
AT zhangying differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels
AT pangjing differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels
AT zhaoyanyang differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels
AT chenbeidong differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels
AT wuwei differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels
AT qiruomei differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels
AT zhangtiemei differentialmicrornasexpressionprofilesinliverfromthreedifferentlifestylemodificationmicemodels