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Exploratory study on classification of diabetes mellitus through a combined Random Forest Classifier
BACKGROUND: Diabetes Mellitus (DM) has become the third chronic non-communicable disease that hits patients after tumors, cardiovascular and cerebrovascular diseases, and has become one of the major public health problems in the world. Therefore, it is of great importance to identify individuals at...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7980612/ https://www.ncbi.nlm.nih.gov/pubmed/33743696 http://dx.doi.org/10.1186/s12911-021-01471-4 |
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author | Wang, Xuchun Zhai, Mengmeng Ren, Zeping Ren, Hao Li, Meichen Quan, Dichen Chen, Limin Qiu, Lixia |
author_facet | Wang, Xuchun Zhai, Mengmeng Ren, Zeping Ren, Hao Li, Meichen Quan, Dichen Chen, Limin Qiu, Lixia |
author_sort | Wang, Xuchun |
collection | PubMed |
description | BACKGROUND: Diabetes Mellitus (DM) has become the third chronic non-communicable disease that hits patients after tumors, cardiovascular and cerebrovascular diseases, and has become one of the major public health problems in the world. Therefore, it is of great importance to identify individuals at high risk for DM in order to establish prevention strategies for DM. METHODS: Aiming at the problem of high-dimensional feature space and high feature redundancy of medical data, as well as the problem of data imbalance often faced. This study explored different supervised classifiers, combined with SVM-SMOTE and two feature dimensionality reduction methods (Logistic stepwise regression and LAASO) to classify the diabetes survey sample data with unbalanced categories and complex related factors. Analysis and discussion of the classification results of 4 supervised classifiers based on 4 data processing methods. Five indicators including Accuracy, Precision, Recall, F1-Score and AUC are selected as the key indicators to evaluate the performance of the classification model. RESULTS: According to the result, Random Forest Classifier combining SVM-SMOTE resampling technology and LASSO feature screening method (Accuracy = 0.890, Precision = 0.869, Recall = 0.919, F1-Score = 0.893, AUC = 0.948) proved the best way to tell those at high risk of DM. Besides, the combined algorithm helps enhance the classification performance for prediction of high-risk people of DM. Also, age, region, heart rate, hypertension, hyperlipidemia and BMI are the top six most critical characteristic variables affecting diabetes. CONCLUSIONS: The Random Forest Classifier combining with SVM-SMOTE and LASSO feature reduction method perform best in identifying high-risk people of DM from individuals. And the combined method proposed in the study would be a good tool for early screening of DM. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-021-01471-4. |
format | Online Article Text |
id | pubmed-7980612 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-79806122021-03-22 Exploratory study on classification of diabetes mellitus through a combined Random Forest Classifier Wang, Xuchun Zhai, Mengmeng Ren, Zeping Ren, Hao Li, Meichen Quan, Dichen Chen, Limin Qiu, Lixia BMC Med Inform Decis Mak Research Article BACKGROUND: Diabetes Mellitus (DM) has become the third chronic non-communicable disease that hits patients after tumors, cardiovascular and cerebrovascular diseases, and has become one of the major public health problems in the world. Therefore, it is of great importance to identify individuals at high risk for DM in order to establish prevention strategies for DM. METHODS: Aiming at the problem of high-dimensional feature space and high feature redundancy of medical data, as well as the problem of data imbalance often faced. This study explored different supervised classifiers, combined with SVM-SMOTE and two feature dimensionality reduction methods (Logistic stepwise regression and LAASO) to classify the diabetes survey sample data with unbalanced categories and complex related factors. Analysis and discussion of the classification results of 4 supervised classifiers based on 4 data processing methods. Five indicators including Accuracy, Precision, Recall, F1-Score and AUC are selected as the key indicators to evaluate the performance of the classification model. RESULTS: According to the result, Random Forest Classifier combining SVM-SMOTE resampling technology and LASSO feature screening method (Accuracy = 0.890, Precision = 0.869, Recall = 0.919, F1-Score = 0.893, AUC = 0.948) proved the best way to tell those at high risk of DM. Besides, the combined algorithm helps enhance the classification performance for prediction of high-risk people of DM. Also, age, region, heart rate, hypertension, hyperlipidemia and BMI are the top six most critical characteristic variables affecting diabetes. CONCLUSIONS: The Random Forest Classifier combining with SVM-SMOTE and LASSO feature reduction method perform best in identifying high-risk people of DM from individuals. And the combined method proposed in the study would be a good tool for early screening of DM. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-021-01471-4. BioMed Central 2021-03-20 /pmc/articles/PMC7980612/ /pubmed/33743696 http://dx.doi.org/10.1186/s12911-021-01471-4 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Wang, Xuchun Zhai, Mengmeng Ren, Zeping Ren, Hao Li, Meichen Quan, Dichen Chen, Limin Qiu, Lixia Exploratory study on classification of diabetes mellitus through a combined Random Forest Classifier |
title | Exploratory study on classification of diabetes mellitus through a combined Random Forest Classifier |
title_full | Exploratory study on classification of diabetes mellitus through a combined Random Forest Classifier |
title_fullStr | Exploratory study on classification of diabetes mellitus through a combined Random Forest Classifier |
title_full_unstemmed | Exploratory study on classification of diabetes mellitus through a combined Random Forest Classifier |
title_short | Exploratory study on classification of diabetes mellitus through a combined Random Forest Classifier |
title_sort | exploratory study on classification of diabetes mellitus through a combined random forest classifier |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7980612/ https://www.ncbi.nlm.nih.gov/pubmed/33743696 http://dx.doi.org/10.1186/s12911-021-01471-4 |
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