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Machine learning estimation of tissue optical properties
Dynamic, in vivo measurement of the optical properties of biological tissues is still an elusive and critically important problem. Here we develop a technique for inverting a Monte Carlo simulation to extract tissue optical properties from the statistical moments of the spatio-temporal response of t...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7985205/ https://www.ncbi.nlm.nih.gov/pubmed/33753794 http://dx.doi.org/10.1038/s41598-021-85994-w |
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author | Hokr, Brett H. Bixler, Joel N. |
author_facet | Hokr, Brett H. Bixler, Joel N. |
author_sort | Hokr, Brett H. |
collection | PubMed |
description | Dynamic, in vivo measurement of the optical properties of biological tissues is still an elusive and critically important problem. Here we develop a technique for inverting a Monte Carlo simulation to extract tissue optical properties from the statistical moments of the spatio-temporal response of the tissue by training a 5-layer fully connected neural network. We demonstrate the accuracy of the method across a very wide parameter space on a single homogeneous layer tissue model and demonstrate that the method is insensitive to parameter selection of the neural network model itself. Finally, we propose an experimental setup capable of measuring the required information in real time in an in vivo environment and demonstrate proof-of-concept level experimental results. |
format | Online Article Text |
id | pubmed-7985205 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-79852052021-03-25 Machine learning estimation of tissue optical properties Hokr, Brett H. Bixler, Joel N. Sci Rep Article Dynamic, in vivo measurement of the optical properties of biological tissues is still an elusive and critically important problem. Here we develop a technique for inverting a Monte Carlo simulation to extract tissue optical properties from the statistical moments of the spatio-temporal response of the tissue by training a 5-layer fully connected neural network. We demonstrate the accuracy of the method across a very wide parameter space on a single homogeneous layer tissue model and demonstrate that the method is insensitive to parameter selection of the neural network model itself. Finally, we propose an experimental setup capable of measuring the required information in real time in an in vivo environment and demonstrate proof-of-concept level experimental results. Nature Publishing Group UK 2021-03-22 /pmc/articles/PMC7985205/ /pubmed/33753794 http://dx.doi.org/10.1038/s41598-021-85994-w Text en © This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Hokr, Brett H. Bixler, Joel N. Machine learning estimation of tissue optical properties |
title | Machine learning estimation of tissue optical properties |
title_full | Machine learning estimation of tissue optical properties |
title_fullStr | Machine learning estimation of tissue optical properties |
title_full_unstemmed | Machine learning estimation of tissue optical properties |
title_short | Machine learning estimation of tissue optical properties |
title_sort | machine learning estimation of tissue optical properties |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7985205/ https://www.ncbi.nlm.nih.gov/pubmed/33753794 http://dx.doi.org/10.1038/s41598-021-85994-w |
work_keys_str_mv | AT hokrbretth machinelearningestimationoftissueopticalproperties AT bixlerjoeln machinelearningestimationoftissueopticalproperties |