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Backbone chemical shift spectral assignments of SARS coronavirus-2 non-structural protein nsp9
As part of an International consortium aiming at the characterization by NMR of the proteins of the SARS-CoV-2 virus, we have obtained the virtually complete assignment of the backbone atoms of the non-structural protein nsp9. This small (12 kDa) protein is encoded by ORF1a, binds to RNA and seems t...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7985572/ https://www.ncbi.nlm.nih.gov/pubmed/33755914 http://dx.doi.org/10.1007/s12104-021-10011-0 |
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author | F. Dudás, Erika Puglisi, Rita Korn, Sophie Marianne Alfano, Caterina Bellone, Maria Laura Piaz, Fabrizio Dal Kelly, Geoff Monaca, Elisa Schlundt, Andreas Schwalbe, Harald Pastore, Annalisa |
author_facet | F. Dudás, Erika Puglisi, Rita Korn, Sophie Marianne Alfano, Caterina Bellone, Maria Laura Piaz, Fabrizio Dal Kelly, Geoff Monaca, Elisa Schlundt, Andreas Schwalbe, Harald Pastore, Annalisa |
author_sort | F. Dudás, Erika |
collection | PubMed |
description | As part of an International consortium aiming at the characterization by NMR of the proteins of the SARS-CoV-2 virus, we have obtained the virtually complete assignment of the backbone atoms of the non-structural protein nsp9. This small (12 kDa) protein is encoded by ORF1a, binds to RNA and seems to be essential for viral RNA synthesis. The crystal structures of the SARS-CoV-2 protein and other homologues suggest that the protein is dimeric as also confirmed by analytical ultracentrifugation and dynamic light scattering. Our data constitute the prerequisite for further NMR-based characterization, and provide the starting point for the identification of small molecule lead compounds that could interfere with RNA binding and prevent viral replication. |
format | Online Article Text |
id | pubmed-7985572 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-79855722021-03-23 Backbone chemical shift spectral assignments of SARS coronavirus-2 non-structural protein nsp9 F. Dudás, Erika Puglisi, Rita Korn, Sophie Marianne Alfano, Caterina Bellone, Maria Laura Piaz, Fabrizio Dal Kelly, Geoff Monaca, Elisa Schlundt, Andreas Schwalbe, Harald Pastore, Annalisa Biomol NMR Assign Article As part of an International consortium aiming at the characterization by NMR of the proteins of the SARS-CoV-2 virus, we have obtained the virtually complete assignment of the backbone atoms of the non-structural protein nsp9. This small (12 kDa) protein is encoded by ORF1a, binds to RNA and seems to be essential for viral RNA synthesis. The crystal structures of the SARS-CoV-2 protein and other homologues suggest that the protein is dimeric as also confirmed by analytical ultracentrifugation and dynamic light scattering. Our data constitute the prerequisite for further NMR-based characterization, and provide the starting point for the identification of small molecule lead compounds that could interfere with RNA binding and prevent viral replication. Springer Netherlands 2021-03-23 2021 /pmc/articles/PMC7985572/ /pubmed/33755914 http://dx.doi.org/10.1007/s12104-021-10011-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article F. Dudás, Erika Puglisi, Rita Korn, Sophie Marianne Alfano, Caterina Bellone, Maria Laura Piaz, Fabrizio Dal Kelly, Geoff Monaca, Elisa Schlundt, Andreas Schwalbe, Harald Pastore, Annalisa Backbone chemical shift spectral assignments of SARS coronavirus-2 non-structural protein nsp9 |
title | Backbone chemical shift spectral assignments of SARS coronavirus-2 non-structural protein nsp9 |
title_full | Backbone chemical shift spectral assignments of SARS coronavirus-2 non-structural protein nsp9 |
title_fullStr | Backbone chemical shift spectral assignments of SARS coronavirus-2 non-structural protein nsp9 |
title_full_unstemmed | Backbone chemical shift spectral assignments of SARS coronavirus-2 non-structural protein nsp9 |
title_short | Backbone chemical shift spectral assignments of SARS coronavirus-2 non-structural protein nsp9 |
title_sort | backbone chemical shift spectral assignments of sars coronavirus-2 non-structural protein nsp9 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7985572/ https://www.ncbi.nlm.nih.gov/pubmed/33755914 http://dx.doi.org/10.1007/s12104-021-10011-0 |
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