Cargando…

Developments in statistical inference when assessing spatiotemporal disease clustering with the tau statistic

The tau statistic [Formula: see text] uses geolocation and, usually, symptom onset time to assess global spatiotemporal clustering from epidemiological data. We test different methods that could bias the clustering range estimate based on the statistic or affect its apparent precision, by comparison...

Descripción completa

Detalles Bibliográficos
Autores principales: Pollington, Timothy M., Tildesley, Michael J., Hollingsworth, T. Déirdre, Chapman, Lloyd A.C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7985614/
https://www.ncbi.nlm.nih.gov/pubmed/33816096
http://dx.doi.org/10.1016/j.spasta.2020.100438
_version_ 1783668284845981696
author Pollington, Timothy M.
Tildesley, Michael J.
Hollingsworth, T. Déirdre
Chapman, Lloyd A.C.
author_facet Pollington, Timothy M.
Tildesley, Michael J.
Hollingsworth, T. Déirdre
Chapman, Lloyd A.C.
author_sort Pollington, Timothy M.
collection PubMed
description The tau statistic [Formula: see text] uses geolocation and, usually, symptom onset time to assess global spatiotemporal clustering from epidemiological data. We test different methods that could bias the clustering range estimate based on the statistic or affect its apparent precision, by comparison with a baseline analysis of an open access measles dataset. From re-analysing this data we find evidence against no clustering and no inhibition, [Formula: see text] (global envelope test). We develop a tau-specific modification of the Loh & Stein spatial bootstrap sampling method, which gives bootstrap tau estimates with 24% lower sampling error and a 110% higher estimated clustering endpoint than previously published (61⋅0 m vs. 29 m) and an equivalent increase in the clustering area of elevated disease odds by 342%. These differences could have important consequences for control efforts. Correct practice of graphical hypothesis testing of no clustering and clustering range estimation of the tau statistic are illustrated in the online Graphical abstract. We advocate proper implementation of this useful statistic, ultimately to reduce inaccuracies in control policy decisions made during disease clustering analysis.
format Online
Article
Text
id pubmed-7985614
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Elsevier B.V
record_format MEDLINE/PubMed
spelling pubmed-79856142021-04-01 Developments in statistical inference when assessing spatiotemporal disease clustering with the tau statistic Pollington, Timothy M. Tildesley, Michael J. Hollingsworth, T. Déirdre Chapman, Lloyd A.C. Spat Stat Article The tau statistic [Formula: see text] uses geolocation and, usually, symptom onset time to assess global spatiotemporal clustering from epidemiological data. We test different methods that could bias the clustering range estimate based on the statistic or affect its apparent precision, by comparison with a baseline analysis of an open access measles dataset. From re-analysing this data we find evidence against no clustering and no inhibition, [Formula: see text] (global envelope test). We develop a tau-specific modification of the Loh & Stein spatial bootstrap sampling method, which gives bootstrap tau estimates with 24% lower sampling error and a 110% higher estimated clustering endpoint than previously published (61⋅0 m vs. 29 m) and an equivalent increase in the clustering area of elevated disease odds by 342%. These differences could have important consequences for control efforts. Correct practice of graphical hypothesis testing of no clustering and clustering range estimation of the tau statistic are illustrated in the online Graphical abstract. We advocate proper implementation of this useful statistic, ultimately to reduce inaccuracies in control policy decisions made during disease clustering analysis. Elsevier B.V 2021-04 /pmc/articles/PMC7985614/ /pubmed/33816096 http://dx.doi.org/10.1016/j.spasta.2020.100438 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Pollington, Timothy M.
Tildesley, Michael J.
Hollingsworth, T. Déirdre
Chapman, Lloyd A.C.
Developments in statistical inference when assessing spatiotemporal disease clustering with the tau statistic
title Developments in statistical inference when assessing spatiotemporal disease clustering with the tau statistic
title_full Developments in statistical inference when assessing spatiotemporal disease clustering with the tau statistic
title_fullStr Developments in statistical inference when assessing spatiotemporal disease clustering with the tau statistic
title_full_unstemmed Developments in statistical inference when assessing spatiotemporal disease clustering with the tau statistic
title_short Developments in statistical inference when assessing spatiotemporal disease clustering with the tau statistic
title_sort developments in statistical inference when assessing spatiotemporal disease clustering with the tau statistic
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7985614/
https://www.ncbi.nlm.nih.gov/pubmed/33816096
http://dx.doi.org/10.1016/j.spasta.2020.100438
work_keys_str_mv AT pollingtontimothym developmentsinstatisticalinferencewhenassessingspatiotemporaldiseaseclusteringwiththetaustatistic
AT tildesleymichaelj developmentsinstatisticalinferencewhenassessingspatiotemporaldiseaseclusteringwiththetaustatistic
AT hollingsworthtdeirdre developmentsinstatisticalinferencewhenassessingspatiotemporaldiseaseclusteringwiththetaustatistic
AT chapmanlloydac developmentsinstatisticalinferencewhenassessingspatiotemporaldiseaseclusteringwiththetaustatistic