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Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation
[Image: see text] The autoxidation of triglyceride (or triacylglycerol, TAG) is a poorly understood complex system. It is known from mass spectrometry measurements that, although initiated by a single molecule, this system involves an abundance of intermediate species and a complex network of reacti...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7988456/ https://www.ncbi.nlm.nih.gov/pubmed/33615781 http://dx.doi.org/10.1021/acs.jcim.0c01163 |
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author | Orlova, Yuliia Gambardella, Alessa A. Kryven, Ivan Keune, Katrien Iedema, Piet D. |
author_facet | Orlova, Yuliia Gambardella, Alessa A. Kryven, Ivan Keune, Katrien Iedema, Piet D. |
author_sort | Orlova, Yuliia |
collection | PubMed |
description | [Image: see text] The autoxidation of triglyceride (or triacylglycerol, TAG) is a poorly understood complex system. It is known from mass spectrometry measurements that, although initiated by a single molecule, this system involves an abundance of intermediate species and a complex network of reactions. For this reason, the attribution of the mass peaks to exact molecular structures is difficult without additional information about the system. We provide such information using a graph theory-based algorithm. Our algorithm performs an automatic discovery of the chemical reaction network that is responsible for the complexity of the mass spectra in drying oils. This knowledge is then applied to match experimentally measured mass spectra with computationally predicted molecular graphs. We demonstrate this methodology on the autoxidation of triolein as measured by electrospray ionization-mass spectrometry (ESI-MS). Our protocol can be readily applied to investigate other oils and their mixtures. |
format | Online Article Text |
id | pubmed-7988456 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-79884562021-03-25 Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation Orlova, Yuliia Gambardella, Alessa A. Kryven, Ivan Keune, Katrien Iedema, Piet D. J Chem Inf Model [Image: see text] The autoxidation of triglyceride (or triacylglycerol, TAG) is a poorly understood complex system. It is known from mass spectrometry measurements that, although initiated by a single molecule, this system involves an abundance of intermediate species and a complex network of reactions. For this reason, the attribution of the mass peaks to exact molecular structures is difficult without additional information about the system. We provide such information using a graph theory-based algorithm. Our algorithm performs an automatic discovery of the chemical reaction network that is responsible for the complexity of the mass spectra in drying oils. This knowledge is then applied to match experimentally measured mass spectra with computationally predicted molecular graphs. We demonstrate this methodology on the autoxidation of triolein as measured by electrospray ionization-mass spectrometry (ESI-MS). Our protocol can be readily applied to investigate other oils and their mixtures. American Chemical Society 2021-02-22 2021-03-22 /pmc/articles/PMC7988456/ /pubmed/33615781 http://dx.doi.org/10.1021/acs.jcim.0c01163 Text en © 2021 The Authors. Published by American Chemical Society Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Orlova, Yuliia Gambardella, Alessa A. Kryven, Ivan Keune, Katrien Iedema, Piet D. Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation |
title | Generative Algorithm for Molecular Graphs Uncovers
Products of Oil Oxidation |
title_full | Generative Algorithm for Molecular Graphs Uncovers
Products of Oil Oxidation |
title_fullStr | Generative Algorithm for Molecular Graphs Uncovers
Products of Oil Oxidation |
title_full_unstemmed | Generative Algorithm for Molecular Graphs Uncovers
Products of Oil Oxidation |
title_short | Generative Algorithm for Molecular Graphs Uncovers
Products of Oil Oxidation |
title_sort | generative algorithm for molecular graphs uncovers
products of oil oxidation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7988456/ https://www.ncbi.nlm.nih.gov/pubmed/33615781 http://dx.doi.org/10.1021/acs.jcim.0c01163 |
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