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Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation

[Image: see text] The autoxidation of triglyceride (or triacylglycerol, TAG) is a poorly understood complex system. It is known from mass spectrometry measurements that, although initiated by a single molecule, this system involves an abundance of intermediate species and a complex network of reacti...

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Autores principales: Orlova, Yuliia, Gambardella, Alessa A., Kryven, Ivan, Keune, Katrien, Iedema, Piet D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7988456/
https://www.ncbi.nlm.nih.gov/pubmed/33615781
http://dx.doi.org/10.1021/acs.jcim.0c01163
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author Orlova, Yuliia
Gambardella, Alessa A.
Kryven, Ivan
Keune, Katrien
Iedema, Piet D.
author_facet Orlova, Yuliia
Gambardella, Alessa A.
Kryven, Ivan
Keune, Katrien
Iedema, Piet D.
author_sort Orlova, Yuliia
collection PubMed
description [Image: see text] The autoxidation of triglyceride (or triacylglycerol, TAG) is a poorly understood complex system. It is known from mass spectrometry measurements that, although initiated by a single molecule, this system involves an abundance of intermediate species and a complex network of reactions. For this reason, the attribution of the mass peaks to exact molecular structures is difficult without additional information about the system. We provide such information using a graph theory-based algorithm. Our algorithm performs an automatic discovery of the chemical reaction network that is responsible for the complexity of the mass spectra in drying oils. This knowledge is then applied to match experimentally measured mass spectra with computationally predicted molecular graphs. We demonstrate this methodology on the autoxidation of triolein as measured by electrospray ionization-mass spectrometry (ESI-MS). Our protocol can be readily applied to investigate other oils and their mixtures.
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spelling pubmed-79884562021-03-25 Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation Orlova, Yuliia Gambardella, Alessa A. Kryven, Ivan Keune, Katrien Iedema, Piet D. J Chem Inf Model [Image: see text] The autoxidation of triglyceride (or triacylglycerol, TAG) is a poorly understood complex system. It is known from mass spectrometry measurements that, although initiated by a single molecule, this system involves an abundance of intermediate species and a complex network of reactions. For this reason, the attribution of the mass peaks to exact molecular structures is difficult without additional information about the system. We provide such information using a graph theory-based algorithm. Our algorithm performs an automatic discovery of the chemical reaction network that is responsible for the complexity of the mass spectra in drying oils. This knowledge is then applied to match experimentally measured mass spectra with computationally predicted molecular graphs. We demonstrate this methodology on the autoxidation of triolein as measured by electrospray ionization-mass spectrometry (ESI-MS). Our protocol can be readily applied to investigate other oils and their mixtures. American Chemical Society 2021-02-22 2021-03-22 /pmc/articles/PMC7988456/ /pubmed/33615781 http://dx.doi.org/10.1021/acs.jcim.0c01163 Text en © 2021 The Authors. Published by American Chemical Society Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Orlova, Yuliia
Gambardella, Alessa A.
Kryven, Ivan
Keune, Katrien
Iedema, Piet D.
Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation
title Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation
title_full Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation
title_fullStr Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation
title_full_unstemmed Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation
title_short Generative Algorithm for Molecular Graphs Uncovers Products of Oil Oxidation
title_sort generative algorithm for molecular graphs uncovers products of oil oxidation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7988456/
https://www.ncbi.nlm.nih.gov/pubmed/33615781
http://dx.doi.org/10.1021/acs.jcim.0c01163
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